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NCBI: 06-JUL-2013

Summary[edit source | edit]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_0530 [new locus tag: NWMN_RS03060 ]
  • pan locus tag?: SAUPAN002344000
  • symbol: NWMN_0530
  • pan gene symbol?: bshB2
  • synonym:
  • product: hypothetical protein

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: NWMN_0530 [new locus tag: NWMN_RS03060 ]
  • symbol: NWMN_0530
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 617097..617762
  • length: 666
  • essential: unknown other strains

Accession numbers[edit source | edit]

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGACTGACGAAAGACATGTATTAGTAATATTTCCACATCCTGATGATGAAACCTTCTCA
    TCTGCAGGCACATTAGCAAATTATATCCAAAAAGGCATACCTGTAACATATGCATGTTTA
    ACCCTAGGACAAATGGGCAGAAATTTAGGTAATCCCCCATTTGCAACACGCGAATCATTA
    CCAAGTATTCGTGAGCGTGAACTAGAAGAAGCTTGTAAAGTTATCGGTATTACTGATTTA
    AGAAAAATGGGTTTACGTGACAAAACTGTCGAATTTGAACCCTATGAACATATAGATGGT
    ATGATTAAATCTTTAATCGATGATACAAATCCATCATTGATTATTTCATTTTATCCTGGA
    TATGCAGTACATCCTGATCACGAAGCAACAGCAGACGCTGTAATTCGAACGGTTGAACGC
    ATGCCTAAAGAAGAACGCCCTCGTTTAACTTTAGTTGCGTTCAGTAATGATGCAACCGAA
    GCTCTTGGAGAACCTGATATTCAAAATGATATTACAGATTTTAAAGAACTTAAAATTAAG
    GCATTTGAAGCACATGCTTCTCAAACAGGTCCATTTTTAAAACAATTAGCAAGTCCTGAA
    ATCGATGGTAAACAACACAGCTTTTTAACAGTCGAACCATATTGGACATATCACTTTAAA
    TCTTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    666

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: NWMN_0530 [new locus tag: NWMN_RS03060 ]
  • symbol: NWMN_0530
  • description: hypothetical protein
  • length: 221
  • theoretical pI: 4.89444
  • theoretical MW: 24921
  • GRAVY: -0.415385

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    MetabolismBiosynthesis of cofactors, prosthetic groups, and carriersGlutathione and analogsbacillithiol biosynthesis deacetylase BshB2 (TIGR04000; EC 3.-.-.-; HMM-score: 357.4)
    MetabolismBiosynthesis of cofactors, prosthetic groups, and carriersGlutathione and analogsbacillithiol biosynthesis deacetylase BshB1 (TIGR04001; EC 3.-.-.-; HMM-score: 61.1)
    Cellular processesCellular processesDetoxificationN-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase (TIGR03445; EC 3.5.1.103; HMM-score: 44.8)
    Cellular processesCellular processesDetoxificationmycothiol conjugate amidase Mca (TIGR03446; HMM-score: 39.8)
  • TheSEED:  
    FIG013761: LmbE family protein 
  • PFAM:
    no clan definedPIG-L; GlcNAc-PI de-N-acetylase (PF02585; HMM-score: 89.3)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP: Intracellular
    • Prediction by SwissProt Classification: Cytoplasmic
    • Pathway Prediction: No pathway
    • Intracellular Possibility: 1
    • Signal Peptide Possibility: -1
    • N-terminally Anchored Score: -1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • Ymax: 0.159
    • Ymax_pos: 58
    • Cmax: 0.197
    • Cmax_pos: 58
    • Smax: 0.175
    • Smax_pos: 54
    • Smean: 0.091
    • D: 0.133
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

Protein sequence[edit source | edit]

  • MTDERHVLVIFPHPDDETFSSAGTLANYIQKGIPVTYACLTLGQMGRNLGNPPFATRESLPSIRERELEEACKVIGITDLRKMGLRDKTVEFEPYEHIDGMIKSLIDDTNPSLIISFYPGYAVHPDHEATADAVIRTVERMPKEERPRLTLVAFSNDATEALGEPDIQNDITDFKELKIKAFEAHASQTGPFLKQLASPEIDGKQHSFLTVEPYWTYHFKS

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]