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NCBI: 06-JUL-2013

Summary[edit source | edit]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_0610 [new locus tag: NWMN_RS03470 ]
  • pan locus tag?: SAUPAN002517000
  • symbol: tagX
  • pan gene symbol?: tagX
  • synonym:
  • product: glycosyltransferase tagX

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: NWMN_0610 [new locus tag: NWMN_RS03470 ]
  • symbol: tagX
  • product: glycosyltransferase tagX
  • replicon: chromosome
  • strand: +
  • coordinates: 690179..691240
  • length: 1062
  • essential: unknown other strains

Accession numbers[edit source | edit]

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGAGGTTTACGATAATCATACCTACATGTAATAATGAGGCAACAATTCGACAATTGTTA
    ATATCTATTGAGAGTAAAGAACACTATAGAATCCTTTGTATTGATGGTGGTTCTACTGAT
    CAAACAATTCCTATGATTGAACGGTTACAAAGAGAACTCAAGCATATTTCATTAATACAA
    TTACAAAATGCTTCGATAGCTACGTGTATTAATAAAGGTTTGATGGATATCAAAATGACA
    GATCCACATGATAGTGACGCATTTATGGTCATAAAACCAACATCAATCGTATTGCCAGGT
    AAATTAGATAGGTTAACTGCTGCTTTCAAAAATAATGATAATATTGATATGGTAATAGGG
    CAGCGAGCTTACAATTACCATGGTGAATGGAAATTGAAAAGTGCTGATGAGTTTATTAAA
    GACAATCGAATCGTTACATTAACGGAACAACCAGATTTGTTATCAATGATGTCTTTTGAC
    GGAAAGTTATTCAGTGCTAAATTTGCTGAATTACAGTGTGACGAAACTTTAGCTAACACA
    TACAATCACGCAATACTTGTCAAGGCGATGCAAAAAGCTACGGATATACATTTAGTTTCA
    CAGATGATTGTCGGAGATAACGATATAGATACACATGCTACAAGTAACGATGAAGATTTT
    AATAGATATATCACAGAAATTATGAAAATAAGACAACGAGTCATGGAAATGTTACTATTA
    CCTGAACAAAGGCTATTATATAGTGATATGGTTGATCGTATTTTATTCAATAATTCATTA
    AAATATTATATGAACGAACACCCAGCAGTAACGCACACGACAATTCAACTCGTAAAAGAC
    TATATTATGTCTATGCAGCATTCTGATTATGTATCGCAAAACATGTTTGACATTATAAAT
    ACAGTTGAATTTATTGGTGAGAATTGGGATAGAGAAATATACGAATTGTGGCGACAAACA
    TTAATTCAAGTGGGCATTAATAGGCCGACTTATAAAAAATTCTTGATACAACTTAAAGGG
    AGAAAGTTTGCACATCGAACAAAATCAATGTTAAAACGATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1062

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: NWMN_0610 [new locus tag: NWMN_RS03470 ]
  • symbol: TagX
  • description: glycosyltransferase tagX
  • length: 353
  • theoretical pI: 6.91091
  • theoretical MW: 41138.4
  • GRAVY: -0.298017

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    poly-beta-1,6 N-acetyl-D-glucosamine synthase (TIGR03937; EC 2.4.1.-; HMM-score: 28)
    Unknown functionEnzymes of unknown specificitytransferase 2, rSAM/selenodomain-associated (TIGR04283; EC 2.-.-.-; HMM-score: 27.8)
    glycosyltransferase, TIGR04182 family (TIGR04182; HMM-score: 26.5)
    mycofactocin system glycosyltransferase (TIGR03965; HMM-score: 15.8)
  • TheSEED:  
    Cell Wall and CapsuleGram-Positive cell wall componentsTeichoic and lipoteichoic acids biosynthesis Teichoic acid biosynthesis protein X 
  • PFAM:
    GT-A (CL0110) Glycos_transf_2; Glycosyl transferase family 2 (PF00535; HMM-score: 41.1)
    Glyco_tranf_2_3; Glycosyltransferase like family 2 (PF13641; HMM-score: 21.8)
    Glyco_tranf_2_2; Glycosyltransferase like family 2 (PF10111; HMM-score: 16.8)
    no clan definedThg1; tRNAHis guanylyltransferase (PF04446; HMM-score: 13.8)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0.32
    • Cytoplasmic Membrane Score: 9.55
    • Cellwall Score: 0.12
    • Extracellular Score: 0.01
    • Internal Helices: 0
  • LocateP: Intracellular
    • Prediction by SwissProt Classification: Cytoplasmic
    • Pathway Prediction: No pathway
    • Intracellular Possibility: 1
    • Signal Peptide Possibility: -1
    • N-terminally Anchored Score: 1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • Ymax: 0.125
    • Ymax_pos: 15
    • Cmax: 0.116
    • Cmax_pos: 67
    • Smax: 0.187
    • Smax_pos: 11
    • Smean: 0.14
    • D: 0.131
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

Protein sequence[edit source | edit]

  • MRFTIIIPTCNNEATIRQLLISIESKEHYRILCIDGGSTDQTIPMIERLQRELKHISLIQLQNASIATCINKGLMDIKMTDPHDSDAFMVIKPTSIVLPGKLDRLTAAFKNNDNIDMVIGQRAYNYHGEWKLKSADEFIKDNRIVTLTEQPDLLSMMSFDGKLFSAKFAELQCDETLANTYNHAILVKAMQKATDIHLVSQMIVGDNDIDTHATSNDEDFNRYITEIMKIRQRVMEMLLLPEQRLLYSDMVDRILFNNSLKYYMNEHPAVTHTTIQLVKDYIMSMQHSDYVSQNMFDIINTVEFIGENWDREIYELWRQTLIQVGINRPTYKKFLIQLKGRKFAHRTKSMLKR

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]