NCBI: 06-JUL-2013

⊟Summary

• organism: Staphylococcus aureus Newman
• locus tag: NWMN_1910 [new locus tag: NWMN_RS11010 ]
• pan locus tag^?: SAUPAN005102000
• symbol: NWMN_1910
• pan gene symbol^?: —
• synonym:
• product: hypothetical protein

⊟Gene

⊟General

• type: CDS
• locus tag: NWMN_1910 [new locus tag: NWMN_RS11010 ]
• symbol: NWMN_1910
• product: hypothetical protein
• replicon: chromosome
• strand: -
• coordinates: 2120345..2120830
• length: 486
• essential: unknown other strains

⊟Accession numbers

• Gene ID: 5331174 NCBI
• RefSeq: YP_001332944 NCBI
• MicrobesOnline: 3707498 MicrobesOnline

⊟Phenotype

Share your knowledge and add information here. [edit]

⊟DNA sequence

• 1
  61
  121
  181
  241
  301
  361
  421
  481
  
  ATGACTGCTGGAACACAACAAGCTATGAATTTTGAAAGTCATCGCTTATGCACGATTAAG
  GCAAAGCAAGAGCTGCGAATAGGCACATGGTCAATTCTACCGTTTGACATCGAACATGAT
  GCTAACGAGCCTGTGGCTTTCTTATTACAAAGTACATTAGGTTATAAGGTTCTGTATGTT
  ACTGATACAAAGTATTTGAAATACAAATTTAACGGCATTACGCACATGATGTTAGAAGTT
  AATTATATCTATGAACAAATGCAGGAAAACATAAAAAACGGCAGTGTGCACAGCACATTA
  GCAAACAGAATTATGGAGTCTCATTTTAGCTTAGAACATGCTATCGGAATGTTAAAAGCA
  AATGATTTAACTAGACTCGAAGAAATACATTTAATTCATTTAAGTAGTCAAAATTCAAAT
  GCAAAATACATTAAAAGTGAAATACAAAAAGTGACGGGCGCGCCCGTTTATGTTGGAGGT
  TTATAA
  60
  120
  180
  240
  300
  360
  420
  480
  486
  

⊟Protein

⊟General

• locus tag: NWMN_1910 [new locus tag: NWMN_RS11010 ]
• symbol: NWMN_1910
• description: hypothetical protein
• length: 161
• theoretical pI: 7.29216
• theoretical MW: 18348
• GRAVY: -0.231056

⊟Function

• TIGRFAM:
• TheSEED:  
  Iron acquisition and metabolismIron acquisition and metabolism - no subcategoryHeme, hemin uptake and utilization systems in GramPositives Metallo-beta-lactamase superfamily domain protein in prophage 
• PFAM:
  Metallo-HOrase (CL0381) Lactamase_B_2; Beta-lactamase superfamily domain (PF12706; HMM-score: 20.7)

⊟Structure, modifications & interactions

• domains:
• modifications:
• cofactors:
• effectors:
• protein partners:

⊟Localization

• PSORTb: unknown (no significant prediction)
  • Cytoplasmic Score: 2.5
  • Cytoplasmic Membrane Score: 2.5
  • Cellwall Score: 2.5
  • Extracellular Score: 2.5
  • Internal Helices: 0
• LocateP: Intracellular
  • Prediction by SwissProt Classification: Cytoplasmic
  • Pathway Prediction: No pathway
  • Intracellular Possibility: 1
  • Signal Peptide Possibility: -1
  • N-terminally Anchored Score: -1
  • Predicted Cleavage Site: No CleavageSite
• SignalP: no predicted signal peptide
  • Ymax: 0.14
  • Ymax_pos: 22
  • Cmax: 0.14
  • Cmax_pos: 22
  • Smax: 0.227
  • Smax_pos: 7
  • Smean: 0.145
  • D: 0.142
• predicted transmembrane helices (TMHMM): 0

⊟Accession numbers

• GI: 151222122 NCBI
• RefSeq: YP_001332944 NCBI
• UniProt: A0A0H3K9K2 UniProt

⊟Protein sequence

• MTAGTQQAMNFESHRLCTIKAKQELRIGTWSILPFDIEHDANEPVAFLLQSTLGYKVLYVTDTKYLKYKFNGITHMMLEVNYIYEQMQENIKNGSVHSTLANRIMESHFSLEHAIGMLKANDLTRLEEIHLIHLSSQNSNAKYIKSEIQKVTGAPVYVGGL

⊟Experimental data

• experimentally validated: no data available

⊟Expression & Regulation

⊟Operon

• MicrobesOnline: NWMN_1908 < NWMN_1909 < NWMN_1910

⊟Regulation

• sigma factor:
• regulator:

⊟Transcription pattern

• S.aureus Expression Data Browser: no data available

⊟Protein synthesis (provided by Aureolib)

• Aureolib: no data available

⊟Protein stability

• half-life: no data available

⊟Other Information

You are kindly invited to share additional interesting facts.