NCBI: 02-MAR-2017

⊟Summary

• organism: Staphylococcus aureus Newman
• locus tag: NWMN_RS03465 [old locus tag: NWMN_0609 ]
• pan locus tag^?: SAUPAN002515000
• symbol: NWMN_RS03465
• pan gene symbol^?: tagB
• synonym:
• product: teichoic acid biosynthesis protein B

⊟Gene

⊟General

• type: CDS
• locus tag: NWMN_RS03465 [old locus tag: NWMN_0609 ]
• symbol: NWMN_RS03465
• product: teichoic acid biosynthesis protein B
• replicon: chromosome
• strand: +
• coordinates: 689079..690182
• length: 1104
• essential: unknown

⊟Accession numbers

• Location: NC_009641 (689079..690182) NCBI
• MicrobesOnline:

⊟Phenotype

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⊟DNA sequence

• 1
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  481
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  1081
  
  ATGAACGTTTTAATAAAGAAATTTTATCATTTGGTAGTTCGAATACTTTCTAAAATGATT
  ACGCCTCAAGTGATTGATAAACCGCATATCGTATTTATGATGACTTTTCCAGAAGATATT
  AAGCCTATCATCAAAGCATTAAATAATTCGTCGTATCAGAAAACTGTTTTAACAACACCA
  AAACAAGCGCCTTATTTATCTGAACTTAGCGACGATGTTGATGTGATAGAAATGACTAAT
  CGAACATTGGTAAAACAAATTAAGGCTTTGAAAAGCGCGCAGATGATTATTATCGATAAT
  TATTACCTATTACTAGGTGGATATAATAAGACTTCTAATCAACACATTGTTCAAACGTGG
  CATGCAAGTGGTGCATTAAAAAACTTTGGCTTAACAGATCATCAAGTCGATGTGTCTGAC
  AAGGCAATGGTTCAGCAGTACCGTAAAGTTTATCAAGCGACGGATTTTTACTTAGTGGGT
  TGTGAACAAATGTCACAATGTTTTAAACAGTCTTTAGGTGCAACAGAAGAGCAAATGCTG
  TATTTTGGGCTTCCGAGAATTAATAAATATTACACAGCTGATAGAGCAACGGTTAAGGCA
  GAGTTAAAGGATAAATATGGAATTACAAATAAGTTGGTATTATATGTACCAACATATAGA
  GAAGATAAAGCAGATAATAGGGCTATTGATAAAGCTTATTTTGAAAAATGTTTACCAGGA
  TATACACTGATTAATAAATTACATCCATCAATTGAAGATTCAGACATTGATGACGTATCT
  TCAATCGACACGTCTACATTAATGCTAATGTCAGATATAATTATTAGCGACTATAGTTCG
  CTGCCAATAGAAGCTAGCTTGTTAGATATTCCAACTATATTTTATGTGTATGATGAAGGA
  ACATATGATCAGGTGAGAGGCCTGAATCAATTTTACAAAGCAATACCGGATAGCTACAAA
  GTGTATACTGAAGAAGATTTAATAATGACGATACAAGAAAAAGAACATCTATTAAGTCCG
  TTATTTAAAGATTGGCATAAGTATAATACTGATAAAAGTTTACATCAGCTCACAGAATAT
  ATAGATAAGATGGTGACAAAATGA
  60
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  1104
  

⊟Protein

⊟General

• locus tag: NWMN_RS03465 [old locus tag: NWMN_0609 ]
• symbol: NWMN_RS03465
• description: teichoic acid biosynthesis protein B
• length: 367
• theoretical pI: 6.24812
• theoretical MW: 42435.6
• GRAVY: -0.291008

⊟Function

• TIGRFAM:
  Cell structureCell envelopeBiosynthesis and degradation of surface polysaccharides and lipopolysaccharidessurface carbohydrate biosynthesis protein (TIGR04396; HMM-score: 21.6)
• TheSEED:
• PFAM:
  GT-B (CL0113) Glyphos_transf; CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase (PF04464; HMM-score: 149.2)

⊟Structure, modifications & interactions

• domains:
• modifications:
• cofactors:
• effectors:
• protein partners:

⊟Localization

• PSORTb: unknown (no significant prediction)
  • Cytoplasmic Score: 2.5
  • Cytoplasmic Membrane Score: 2.5
  • Cellwall Score: 2.5
  • Extracellular Score: 2.5
  • Internal Helices: 0
• LocateP:
• SignalP: no predicted signal peptide
  • Ymax: 0.23
  • Ymax_pos: 14
  • Cmax: 0.115
  • Cmax_pos: 27
  • Smax: 0.648
  • Smax_pos: 7
  • Smean: 0.531
  • D: 0.347
• predicted transmembrane helices (TMHMM): 0

⊟Accession numbers

• GI: 447024347 NCBI
• RefSeq: WP_001101603 NCBI
• UniProt:

⊟Protein sequence

• MNVLIKKFYHLVVRILSKMITPQVIDKPHIVFMMTFPEDIKPIIKALNNSSYQKTVLTTPKQAPYLSELSDDVDVIEMTNRTLVKQIKALKSAQMIIIDNYYLLLGGYNKTSNQHIVQTWHASGALKNFGLTDHQVDVSDKAMVQQYRKVYQATDFYLVGCEQMSQCFKQSLGATEEQMLYFGLPRINKYYTADRATVKAELKDKYGITNKLVLYVPTYREDKADNRAIDKAYFEKCLPGYTLINKLHPSIEDSDIDDVSSIDTSTLMLMSDIIISDYSSLPIEASLLDIPTIFYVYDEGTYDQVRGLNQFYKAIPDSYKVYTEEDLIMTIQEKEHLLSPLFKDWHKYNTDKSLHQLTEYIDKMVTK

⊟Experimental data

• experimentally validated: no data available

⊟Expression & Regulation

⊟Operon

• NWMN_RS03465 no polycistronic organisation predicted

⊟Regulation

• sigma factor:
• regulator:

⊟Transcription pattern

• S.aureus Expression Data Browser: no data available

⊟Protein synthesis (provided by Aureolib)

• Aureolib: no data available

⊟Protein stability

• half-life: no data available

⊟Other Information

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