Pangenome04-0298108BA0217611819-9771193COLECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50N315NCTC8325NewmanRF122ST398T0131TCH60TW20USA300_FPR3757USA300_TCH1516VC40

NCBI: 02-MAR-2017

⊟Summary

• organism: Staphylococcus aureus Newman
• locus tag: NWMN_RS05855 [old locus tag: NWMN_1034 ]
• pan locus tag^?: SAUPAN001701000
• symbol: NWMN_RS05855
• pan gene symbol^?: —
• synonym:
• product: hypothetical protein

⊟Gene

⊟General

• type: CDS
• locus tag: NWMN_RS05855 [old locus tag: NWMN_1034 ]
• symbol: NWMN_RS05855
• product: hypothetical protein
• replicon: chromosome
• strand: +
• coordinates: 1135508..1135807
• length: 300
• essential: unknown

⊟Accession numbers

• Location: NC_009641 (1135508..1135807) NCBI
• MicrobesOnline:

⊟Phenotype

• Share your knowledge and add information here. [edit]

⊟DNA sequence

• 1
  61
  121
  181
  241
  
  ATGTTTGGATTTACCAAACGACACGAACAAGATTGGCGTTTAACGCGATTAGAAGAAAAT
  GATAAGACTATGTTTGAAAAATTCGACAGAATAGAAGACAGTCTGAGAACGCAAGAAAAA
  ATTTATGACAAGTTAGATAGAAATTTCGAAGAACTAAGGCGTGACAAGGTAGAAGATGAA
  AAGAATAAAGAAAAGAATGCTAAGAATATTAGAGACATAAAAATGTGGATTCTCGGTTTG
  ATAGGGACTATCTTCAGTACGATTGTCATAGCTTTACTAAGAACTATTTTTGGTATTTAA
  60
  120
  180
  240
  300
  

⊟Protein

⊟General

• locus tag: NWMN_RS05855 [old locus tag: NWMN_1034 ]
• symbol: NWMN_RS05855
• description: hypothetical protein
• length: 99
• theoretical pI: 9.03807
• theoretical MW: 12082.8
• GRAVY: -0.765657

⊟Function

• reaction:
• TIGRFAM:
  Genetic information processingDNA metabolismOtherMutS2 family protein (TIGR01069; HMM-score: 8.3)
• TheSEED:
• PFAM:
  no clan definedDUF2951; Protein of unknown function (DUF2951) (PF11166; HMM-score: 181.6)
  XhlA; Haemolysin XhlA (PF10779; HMM-score: 15.4)
  Vps51 (CL0295) Sec3_C_2; Sec3 exocyst complex subunit (PF15278; HMM-score: 14.7)
  no clan definedTelA; Toxic anion resistance protein (TelA) (PF05816; HMM-score: 13.3)
  DUF2207; Predicted membrane protein (DUF2207) (PF09972; HMM-score: 12.2)
  DUF3452; Domain of unknown function (DUF3452) (PF11934; HMM-score: 12.1)

⊟Structure, modifications & interactions

• domains:
• modifications:
• cofactors:
• effectors:
• protein partners:

⊟Localization

• PSORTb: Cytoplasmic Membrane
  • Cytoplasmic Score: 1.78
  • Cytoplasmic Membrane Score: 8.16
  • Cellwall Score: 0.06
  • Extracellular Score: 0.01
  • Internal Helix: 1
• LocateP:
• SignalP: no predicted signal peptide
  • Ymax: 0.109
  • Ymax_pos: 67
  • Cmax: 0.101
  • Cmax_pos: 4
  • Smax: 0.129
  • Smax_pos: 59
  • Smean: 0.091
  • D: 0.102
• predicted transmembrane helices (TMHMM): 1

⊟Accession numbers

• GI: 446388932 NCBI
• RefSeq: WP_000466787 NCBI
• UniProt:

⊟Protein sequence

• MFGFTKRHEQDWRLTRLEENDKTMFEKFDRIEDSLRTQEKIYDKLDRNFEELRRDKVEDEKNKEKNAKNIRDIKMWILGLIGTIFSTIVIALLRTIFGI

⊟Experimental data

• experimentally validated: no data available

⊟Expression & Regulation

⊟Operon

• NWMN_RS05855 no polycistronic organisation predicted

⊟Regulation

• sigma factor:
• regulator:

⊟Transcription pattern

• S.aureus Expression Data Browser: no data available

⊟Protein synthesis (provided by Aureolib)

• Aureolib: no data available

⊟Protein stability

• half-life: no data available

⊟Other Information

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