NCBI: 02-MAR-2017
Contents
⊟Summary[edit source | edit]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_RS05855 [old locus tag: NWMN_1034 ]
- pan locus tag?: SAUPAN001701000
- symbol: NWMN_RS05855
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit source | edit]
⊟Gene[edit source | edit]
⊟General[edit source | edit]
- type: CDS
- locus tag: NWMN_RS05855 [old locus tag: NWMN_1034 ]
- symbol: NWMN_RS05855
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 1135508..1135807
- length: 300
- essential: unknown
⊟Accession numbers[edit source | edit]
- Location: NC_009641 (1135508..1135807) NCBI
- MicrobesOnline:
⊟Phenotype[edit source | edit]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit source | edit]
- 1
61
121
181
241ATGTTTGGATTTACCAAACGACACGAACAAGATTGGCGTTTAACGCGATTAGAAGAAAAT
GATAAGACTATGTTTGAAAAATTCGACAGAATAGAAGACAGTCTGAGAACGCAAGAAAAA
ATTTATGACAAGTTAGATAGAAATTTCGAAGAACTAAGGCGTGACAAGGTAGAAGATGAA
AAGAATAAAGAAAAGAATGCTAAGAATATTAGAGACATAAAAATGTGGATTCTCGGTTTG
ATAGGGACTATCTTCAGTACGATTGTCATAGCTTTACTAAGAACTATTTTTGGTATTTAA60
120
180
240
300
⊟Protein[edit source | edit]
⊟General[edit source | edit]
- locus tag: NWMN_RS05855 [old locus tag: NWMN_1034 ]
- symbol: NWMN_RS05855
- description: hypothetical protein
- length: 99
- theoretical pI: 9.03807
- theoretical MW: 12082.8
- GRAVY: -0.765657
⊟Function[edit source | edit]
- reaction:
- TIGRFAM: DNA metabolismOtherMutS2 family protein (TIGR01069; HMM-score: 8.3)
- TheSEED:
- PFAM: no clan definedDUF2951; Protein of unknown function (DUF2951) (PF11166; HMM-score: 181.6)XhlA; Haemolysin XhlA (PF10779; HMM-score: 15.4)Vps51 (CL0295) Sec3_C_2; Sec3 exocyst complex subunit (PF15278; HMM-score: 14.7)no clan definedTelA; Toxic anion resistance protein (TelA) (PF05816; HMM-score: 13.3)DUF2207; Predicted membrane protein (DUF2207) (PF09972; HMM-score: 12.2)DUF3452; Domain of unknown function (DUF3452) (PF11934; HMM-score: 12.1)
⊟Structure, modifications & interactions[edit source | edit]
- domains:
- modifications:
- cofactors:
- effectors:
- protein partners:
⊟Localization[edit source | edit]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 1.78
- Cytoplasmic Membrane Score: 8.16
- Cellwall Score: 0.06
- Extracellular Score: 0.01
- Internal Helix: 1
- LocateP:
- SignalP: no predicted signal peptide
- Ymax: 0.109
- Ymax_pos: 67
- Cmax: 0.101
- Cmax_pos: 4
- Smax: 0.129
- Smax_pos: 59
- Smean: 0.091
- D: 0.102
- predicted transmembrane helices (TMHMM): 1
⊟Accession numbers[edit source | edit]
⊟Protein sequence[edit source | edit]
- MFGFTKRHEQDWRLTRLEENDKTMFEKFDRIEDSLRTQEKIYDKLDRNFEELRRDKVEDEKNKEKNAKNIRDIKMWILGLIGTIFSTIVIALLRTIFGI
⊟Experimental data[edit source | edit]
- experimentally validated: no data available
⊟Expression & Regulation[edit source | edit]
⊟Operon[edit source | edit]
- NWMN_RS05855 no polycistronic organisation predicted
⊟Regulation[edit source | edit]
- sigma factor:
- regulator:
⊟Transcription pattern[edit source | edit]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit source | edit]
- Aureolib: no data available
⊟Protein stability[edit source | edit]
- half-life: no data available
⊟Biological Material[edit source | edit]
⊟Mutants[edit source | edit]
⊟Expression vector[edit source | edit]
⊟lacZ fusion[edit source | edit]
⊟GFP fusion[edit source | edit]
⊟two-hybrid system[edit source | edit]
⊟FLAG-tag construct[edit source | edit]
⊟Antibody[edit source | edit]
⊟Other Information[edit source | edit]
You are kindly invited to share additional interesting facts.
⊟Literature[edit source | edit]
⊟References[edit source | edit]
⊟Relevant publications[edit source | edit]