NCBI: 02-MAR-2017
Contents
⊟Summary[edit source | edit]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_RS08295 [old locus tag: NWMN_1472 ]
- pan locus tag?: SAUPAN004151000
- symbol: NWMN_RS08295
- pan gene symbol?: dgkA
- synonym:
- product: diacylglycerol kinase
⊟Genome View[edit source | edit]
⊟Gene[edit source | edit]
⊟General[edit source | edit]
- type: CDS
- locus tag: NWMN_RS08295 [old locus tag: NWMN_1472 ]
- symbol: NWMN_RS08295
- product: diacylglycerol kinase
- replicon: chromosome
- strand: -
- coordinates: 1639904..1640248
- length: 345
- essential: unknown
⊟Accession numbers[edit source | edit]
- Location: NC_009641 (1639904..1640248) NCBI
- MicrobesOnline:
⊟Phenotype[edit source | edit]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit source | edit]
- 1
61
121
181
241
301ATGAAAAGGTTTAAATATGCACTTGATGGGCTGAAAATCTTAATTCAAAAAGACTATAAA
TTTCTTTTACATGTGTTTGCAATGATTGTTGCTATTGTCTTTGGTCTCGTACTAAATATT
AATCGGATTGAGTGGATATTTATACTCATTGCTATTGCATTAGTTCTCACTGTTGAAGCT
TTAAACACTGCTATTGAATATGTTGTCGATTTAGTGACCGTTGAATATCATGATTTAGCT
AAATACGCTAAAGATATTGCGGCTTTTAGTGTACTTATAGTTTCAATATTAGCATTTATT
ATAGGTTTAATAGTATTTTTACCACATTTTATAGCGTTATTTTAG60
120
180
240
300
345
⊟Protein[edit source | edit]
⊟General[edit source | edit]
- locus tag: NWMN_RS08295 [old locus tag: NWMN_1472 ]
- symbol: NWMN_RS08295
- description: diacylglycerol kinase
- length: 114
- theoretical pI: 7.76368
- theoretical MW: 12969.7
- GRAVY: 1.35
⊟Function[edit source | edit]
- reaction:
- TIGRFAM: cxxc_20_cxxc protein (TIGR04104; HMM-score: 5.3)
- TheSEED:
- PFAM: no clan definedDAGK_prokar; Prokaryotic diacylglycerol kinase (PF01219; HMM-score: 112)IT (CL0182) CitMHS; Citrate transporter (PF03600; HMM-score: 9.6)no clan definedSPC12; Microsomal signal peptidase 12 kDa subunit (SPC12) (PF06645; HMM-score: 8.4)
⊟Structure, modifications & interactions[edit source | edit]
- domains:
- modifications:
- cofactors:
- effectors:
- protein partners:
⊟Localization[edit source | edit]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 10
- Cellwall Score: 0
- Extracellular Score: 0
- Internal Helices: 3
- LocateP:
- SignalP: no predicted signal peptide
- Ymax: 0.093
- Ymax_pos: 23
- Cmax: 0.132
- Cmax_pos: 46
- Smax: 0.133
- Smax_pos: 1
- Smean: 0.08
- D: 0.088
- predicted transmembrane helices (TMHMM): 3
⊟Accession numbers[edit source | edit]
⊟Protein sequence[edit source | edit]
- MKRFKYALDGLKILIQKDYKFLLHVFAMIVAIVFGLVLNINRIEWIFILIAIALVLTVEALNTAIEYVVDLVTVEYHDLAKYAKDIAAFSVLIVSILAFIIGLIVFLPHFIALF
⊟Experimental data[edit source | edit]
- experimentally validated: no data available
⊟Expression & Regulation[edit source | edit]
⊟Operon[edit source | edit]
- NWMN_RS08295 no polycistronic organisation predicted
⊟Regulation[edit source | edit]
- sigma factor:
- regulator:
⊟Transcription pattern[edit source | edit]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit source | edit]
- Aureolib: no data available
⊟Protein stability[edit source | edit]
- half-life: no data available
⊟Biological Material[edit source | edit]
⊟Mutants[edit source | edit]
⊟Expression vector[edit source | edit]
⊟lacZ fusion[edit source | edit]
⊟GFP fusion[edit source | edit]
⊟two-hybrid system[edit source | edit]
⊟FLAG-tag construct[edit source | edit]
⊟Antibody[edit source | edit]
⊟Other Information[edit source | edit]
You are kindly invited to share additional interesting facts.
⊟Literature[edit source | edit]
⊟References[edit source | edit]
⊟Relevant publications[edit source | edit]