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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_RS11445 [old locus tag: NWMN_1978 ]
  • pan locus tag?: SAUPAN005344000
  • symbol: NWMN_RS11445
  • pan gene symbol?:
  • synonym:
  • product: hypothetical protein

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: NWMN_RS11445 [old locus tag: NWMN_1978 ]
  • symbol: NWMN_RS11445
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 2195267..2196850
  • length: 1584
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_009641 (2195267..2196850) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGTCTGAACCTCAAAAATTACATCCGATTTCATATTTTAATGGCATAATCAATGCTATC
    AAACAAAACATAGTCGTCTTTTTTATTTTCATTATCTTTCAATTGAAAGATTTTGATTAT
    ACGAATCCCGAATCATATTTATGGATAGGTATTGTATTTGTATTCTTTTTAATATCATAC
    ATTTCTCAAATTGTCGGAATTATGAACACGCGATATTGGATTGAGGATAATTATTTCATT
    TTAACAACAGGTATTTTTAATAAAAAGCGTAAAGAATTAAATATAAAACGTATTCAGTCC
    GTTGATATGACACAAGGGGTCGTCAATCAAATTATTGGTGGTGTGGATTTACAAATCAAA
    ACACCAAGTGATGGTATTGTCTTAAGTGTTATTTCGAAAAAACAAGGTGAATATCTTGAA
    CGATATATTGATCAATTGCAAACAGAGTTGAAGACAGAAGTGGCGCAAAAGTCTAGTGCT
    GAGAAGAATGACAACTGTAATCATGACATTGAAGGTAATGTGGAAGACATCGCAGAAGGT
    CGCTTAGATGAAGTGCAGAACACTGATAGTATGCTTAATCAGAAAAATAAACGCATTCCT
    ATATATCAGATGAATTTTAAAGAATCACTATTTATGGCAATGACCAGTGGCGCCATTGGT
    GTAACGTTAGCAGCTTTAGTACCGATTTACGGGGCTGTAAGAGAGTTGATCCCATGGTCG
    AAGCTAAATCATGAAATTAGTCAATGGGTTCAAATTGTAAGTATTTCAGTATTAATCATC
    ATTTTACTAGTATTAATAGTGGAATATATTATTGGAACGATTATAACAATGATAAGATTT
    TATGGCTTTTCGGTGATGCTTGAAAATGAGCAACTTAAAATTGAATATGGTCTCTTTAAC
    AAGAAGAAAGTAACTGTACCAACGAAACGATTGCAAGCTGTTGTTGAACGTCAGTCATAT
    ATACGAAGATTATTTGGCTACACAGCAATACATTTTATCATCACAAGTGATTTTGAAAAT
    AAAAAAATCGAAGATGATGACAATGATTCAGGTAGTGTGCCGATATTGCCGTTTATTAAA
    CGAGACAAAGCATATCAAATTATCCAGAATTTAGTACCAGATTTATCTTATCAACAAGTT
    AATGAAGGTATGCCTTTGTCAGGTTTCCACAGACACTTTTTAATACCTAGTATTATTGTC
    ATAGCTATGGCAGGTATAGGCTGTTATTTTTGGAATCAATTATTATTGTTATTTACGATT
    ATAACAATAGTCATTATTGGTTTATTTGTGATCAAAGGATATCTTTATGTCAAACATGCG
    GGTTTTAAAATGACAGAAGAACAAATTACTATCCAGAATTTCGAGCTATTGAAACGAAAT
    ATTTATTATTTTAAAGCGCATCACATTATAGGATTTGACACTTGGCAACATACATTACTT
    AAACGCAACAATTTAAATAATTTTAGCTTTATTGTTGCTAAAGGTGTGGGAGCCCAATCG
    ATTAACTTAAAATACGCAAGAAGTGAAGATGCAAATAAATTGAAATCATGGTATTTAAGA
    GGTGAAAATGATGAGGGATTATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1380
    1440
    1500
    1560
    1584

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: NWMN_RS11445 [old locus tag: NWMN_1978 ]
  • symbol: NWMN_RS11445
  • description: hypothetical protein
  • length: 527
  • theoretical pI: 8.46936
  • theoretical MW: 60803.3
  • GRAVY: 0.071537

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
  • TheSEED:
  • PFAM:
    PH (CL0266) bPH_2; Bacterial PH domain (PF03703; HMM-score: 98.4)
    bPH_4; Bacterial PH domain (PF06713; HMM-score: 17.2)
    no clan definedMgtE; Divalent cation transporter (PF01769; HMM-score: 11.1)
    DUF2970; Protein of unknown function (DUF2970) (PF11174; HMM-score: 10.7)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 6
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.094
    • Ymax_pos: 11
    • Cmax: 0.109
    • Cmax_pos: 68
    • Smax: 0.127
    • Smax_pos: 34
    • Smean: 0.087
    • D: 0.091
  • predicted transmembrane helices (TMHMM): 6

Accession numbers[edit source | edit]

  • GI: 447217375 NCBI
  • RefSeq: WP_001294631 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MSEPQKLHPISYFNGIINAIKQNIVVFFIFIIFQLKDFDYTNPESYLWIGIVFVFFLISYISQIVGIMNTRYWIEDNYFILTTGIFNKKRKELNIKRIQSVDMTQGVVNQIIGGVDLQIKTPSDGIVLSVISKKQGEYLERYIDQLQTELKTEVAQKSSAEKNDNCNHDIEGNVEDIAEGRLDEVQNTDSMLNQKNKRIPIYQMNFKESLFMAMTSGAIGVTLAALVPIYGAVRELIPWSKLNHEISQWVQIVSISVLIIILLVLIVEYIIGTIITMIRFYGFSVMLENEQLKIEYGLFNKKKVTVPTKRLQAVVERQSYIRRLFGYTAIHFIITSDFENKKIEDDDNDSGSVPILPFIKRDKAYQIIQNLVPDLSYQQVNEGMPLSGFHRHFLIPSIIVIAMAGIGCYFWNQLLLLFTIITIVIIGLFVIKGYLYVKHAGFKMTEEQITIQNFELLKRNIYYFKAHHIIGFDTWQHTLLKRNNLNNFSFIVAKGVGAQSINLKYARSEDANKLKSWYLRGENDEGL

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • NWMN_RS11445 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]