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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_RS12210 [old locus tag: NWMN_2110 ]
  • pan locus tag?: SAUPAN005624000
  • symbol: NWMN_RS12210
  • pan gene symbol?: budA1
  • synonym:
  • product: alpha-acetolactate decarboxylase

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: NWMN_RS12210 [old locus tag: NWMN_2110 ]
  • symbol: NWMN_RS12210
  • product: alpha-acetolactate decarboxylase
  • replicon: chromosome
  • strand: -
  • coordinates: 2348054..2348758
  • length: 705
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_009641 (2348054..2348758) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
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    481
    541
    601
    661
    ATGACTAATGTTTTATACCAACATGGTACATTAGGCACATTAATGGCAGGATTATTAAAA
    GGAACTGCATCAATAAATGAATTATTGCAACATGGTGACTTAGGTATCGCTACACTAACA
    GGTTCAAACGGTGAGGTAATCTTTTTAGATGGAAAAGCTTACCATGCAAATGAACATAAA
    GAATTTGTAGAATTAAAAGGTGACGAGTTAACACCATATGCAACTGTAACTAAATTTGTA
    GCAGATACAAGCTATGAAACGAAAGATAAATCTTCAGAAGCAGTTTTTGCAGAAATTAAG
    GAAAAGATGTTGAGTGAAAATTTATTTTCAGCAGTAAAAATTTCAGGCTTATTTAAAAAA
    ATGCATGTACGTATGATGCCGGCTCAAGAACCACCTTATACACGTTTAATCGATTCAGCT
    AGAAGACAACCTGAACAAACTGAAACGTATGTCAAAGGTTCAGTCGTTGGTTTCTTTACA
    CCAGAATTATTCCATGGTATCGGATCAGCAGGATTTCATGTACACTTTGCGAATGATGAT
    CGTAACTTTGGTGGACATGTCTTAGATTTTGAAGTAGAAGATGTTAAAGTAGAAATCCAA
    AATATAGAAACATTTGAACAGCATTTTCCAATTCAAGATAAAGATTTCACTAAAGCAAAT
    ATTGACTATAAAGATATTGCAGACGAAATTAGAGAAGCTGAATAA
    60
    120
    180
    240
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    360
    420
    480
    540
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    660
    705

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: NWMN_RS12210 [old locus tag: NWMN_2110 ]
  • symbol: NWMN_RS12210
  • description: alpha-acetolactate decarboxylase
  • length: 234
  • theoretical pI: 4.83309
  • theoretical MW: 26223.3
  • GRAVY: -0.363675

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    MetabolismEnergy metabolismFermentationalpha-acetolactate decarboxylase (TIGR01252; EC 4.1.1.5; HMM-score: 251.5)
  • TheSEED:
  • PFAM:
    ALDC (CL0615) AAL_decarboxy; Alpha-acetolactate decarboxylase (PF03306; HMM-score: 252.7)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.164
    • Ymax_pos: 26
    • Cmax: 0.137
    • Cmax_pos: 57
    • Smax: 0.304
    • Smax_pos: 20
    • Smean: 0.228
    • D: 0.189
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

  • GI: 446108279 NCBI
  • RefSeq: WP_000186134 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MTNVLYQHGTLGTLMAGLLKGTASINELLQHGDLGIATLTGSNGEVIFLDGKAYHANEHKEFVELKGDELTPYATVTKFVADTSYETKDKSSEAVFAEIKEKMLSENLFSAVKISGLFKKMHVRMMPAQEPPYTRLIDSARRQPEQTETYVKGSVVGFFTPELFHGIGSAGFHVHFANDDRNFGGHVLDFEVEDVKVEIQNIETFEQHFPIQDKDFTKANIDYKDIADEIREAE

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • NWMN_RS12210 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]