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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_RS13125 [old locus tag: NWMN_2280 ]
  • pan locus tag?: SAUPAN005899000
  • symbol: NWMN_RS13125
  • pan gene symbol?:
  • synonym:
  • product: hypothetical protein

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: NWMN_RS13125 [old locus tag: NWMN_2280 ]
  • symbol: NWMN_RS13125
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 2504390..2504773
  • length: 384
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_009641 (2504390..2504773) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    ATGAAAGAACGTGGCTATATCGAACAGCTTTGGCGTGAGGAAAAATATCATGTATTGTTA
    CACAGTCAACAGTCTTACCAAATGATAAGGAATGCTTTAAAAACGGATTTATCACTTCAT
    CAAGTTCAACAAATGATTGATGTTGCTTTGTTAATTGAACCGAGTATAGGAAGTGTATGT
    AATGCTTTTGATCATATGTGGGGATATTTAAAAAAATGTGCGAATGAAGAAGAAAGACAA
    CAATCAAAACTACTTAAAGCTGATTTTATTAATGGTAAAATCGACACCCAAACTTTATTA
    GATTTTTTAGCAGAACTTGCTAATAAATATGATGTTCAATATTTACTACAAAGTCGTGTT
    TTAAACACAAAAAGAAAGAGATAG
    60
    120
    180
    240
    300
    360
    384

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: NWMN_RS13125 [old locus tag: NWMN_2280 ]
  • symbol: NWMN_RS13125
  • description: hypothetical protein
  • length: 127
  • theoretical pI: 8.66866
  • theoretical MW: 15044.2
  • GRAVY: -0.540945

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
  • TheSEED:
  • PFAM:
    no clan definedDUF1722; Protein of unknown function (DUF1722) (PF08349; HMM-score: 77.6)
    RecG_N; RecG N-terminal helical domain (PF17190; HMM-score: 14.7)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.106
    • Ymax_pos: 49
    • Cmax: 0.116
    • Cmax_pos: 63
    • Smax: 0.14
    • Smax_pos: 44
    • Smean: 0.074
    • D: 0.094
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

  • GI: 446587048 NCBI
  • RefSeq: WP_000664394 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MKERGYIEQLWREEKYHVLLHSQQSYQMIRNALKTDLSLHQVQQMIDVALLIEPSIGSVCNAFDHMWGYLKKCANEEERQQSKLLKADFINGKIDTQTLLDFLAELANKYDVQYLLQSRVLNTKRKR

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • NWMN_RS13125 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]