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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_RS13360 [old locus tag: NWMN_2321 ]
  • pan locus tag?: SAUPAN005962000
  • symbol: NWMN_RS13360
  • pan gene symbol?: bioX
  • synonym:
  • product: hypothetical protein

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: NWMN_RS13360 [old locus tag: NWMN_2321 ]
  • symbol: NWMN_RS13360
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 2550536..2551003
  • length: 468
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_009641 (2550536..2551003) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    ATGACATCAAAAGATATTACTCAAATTAGTGTCATTGCTGCGATTTTAACCATTTTGGCA
    GTTTTGAAAATACCGTCCATTATACCAGGATTAGATTTTCAATTATCTGCACCGGCAGCA
    TTATTGATATTAGCTTTCTTTGGAATTAAAAAGTACTTTTTAGGTGGATTATTATCTAGC
    CTATTATTACTAGTATTTGGCGTATTTAATCCAATTAATGTGATTATCTCTATTATATTT
    AGAGTTATAGCTATTGCAGTTGTTTATTTATTGAAAATAAATGTACTATCATTAGTTTTA
    GCAAGTGTATTAGGCAGTTTGGTATCTAGGCTACTATTATCTATTATTTTAAATTTACCT
    GTGTGGGTAGTGTTGTTAAACGCGATTCCAGGCGTAATATTCACTTTAATTGTAGCTATT
    CCTTTATATCTCACATTGAGAAAAAGAATGGCAGTATTACTAAGATAA
    60
    120
    180
    240
    300
    360
    420
    468

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: NWMN_RS13360 [old locus tag: NWMN_2321 ]
  • symbol: NWMN_RS13360
  • description: hypothetical protein
  • length: 155
  • theoretical pI: 11.3944
  • theoretical MW: 16754.8
  • GRAVY: 1.65742

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
  • TheSEED:
  • PFAM:
    Gx_transp (CL0315) QueT; QueT transporter (PF06177; HMM-score: 33.2)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 6
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.158
    • Ymax_pos: 31
    • Cmax: 0.132
    • Cmax_pos: 31
    • Smax: 0.28
    • Smax_pos: 24
    • Smean: 0.172
    • D: 0.163
  • predicted transmembrane helices (TMHMM): 4

Accession numbers[edit source | edit]

  • GI: 446123093 NCBI
  • RefSeq: WP_000200948 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MTSKDITQISVIAAILTILAVLKIPSIIPGLDFQLSAPAALLILAFFGIKKYFLGGLLSSLLLLVFGVFNPINVIISIIFRVIAIAVVYLLKINVLSLVLASVLGSLVSRLLLSIILNLPVWVVLLNAIPGVIFTLIVAIPLYLTLRKRMAVLLR

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • NWMN_RS13360 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]