NCBI: 26-AUG-2013

⊟Summary

• organism: Staphylococcus aureus N315
• locus tag: SA0625
• pan locus tag^?: SAUPAN002551000
• symbol: SA0625
• pan gene symbol^?: —
• synonym:
• product: hypothetical protein

⊟Gene

⊟General

• type: CDS
• locus tag: SA0625
• symbol: SA0625
• product: hypothetical protein
• replicon: chromosome
• strand: +
• coordinates: 722032..722220
• length: 189
• essential: no DEG

⊟Accession numbers

• Gene ID: 1123432 NCBI
• RefSeq: NP_373880 NCBI
• BioCyc:
• MicrobesOnline: 102906 MicrobesOnline

⊟Phenotype

Share your knowledge and add information here. [edit]

⊟DNA sequence

• 1
  61
  121
  181
  
  TTGCAATATGTAGTGCCTAAAGGAACAATTTTTGCTTCTTCAATCGAAATTTCAAATACT
  TATAGTTTAGTAGGTTGTATGTGTCAACCGGCATTTGAGTTTAAGCAGTTTGAATTGTTT
  AAGCAATCTGAATTAATTACACAATATCCGCATCTTAAATCAGTGATTGAAAAATATGCT
  TTAAAATAA
  60
  120
  180
  189
  

⊟Protein

⊟General

• locus tag: SA0625
• symbol: SA0625
• description: hypothetical protein
• length: 62
• theoretical pI: 8.20161
• theoretical MW: 7154.34
• GRAVY: 0.0596774

⊟Function

• TIGRFAM:
• TheSEED:  
  FIG018171: hypothetical protein of Cupin superfamily 
• PFAM:
  Cupin (CL0029) Cupin_5; Cupin superfamily (DUF985) (PF06172; HMM-score: 33.1)

⊟Structure, modifications & interactions

• domains:
• modifications:
• cofactors:
• effectors:
• protein partners:

⊟Localization

• PSORTb: unknown (no significant prediction)
  • Cytoplasmic Score: 2.5
  • Cytoplasmic Membrane Score: 2.5
  • Cellwall Score: 2.5
  • Extracellular Score: 2.5
  • Internal Helices: 0
• LocateP: Intracellular
  • Prediction by SwissProt Classification: Cytoplasmic
  • Pathway Prediction: No pathway
  • Intracellular Possibility: 1
  • Signal Peptide Possibility: -1
  • N-terminally Anchored Score: 1
  • Predicted Cleavage Site: No CleavageSite
• SignalP: no predicted signal peptide
  • Ymax: 0.144
  • Ymax_pos: 31
  • Cmax: 0.131
  • Cmax_pos: 31
  • Smax: 0.213
  • Smax_pos: 1
  • Smean: 0.156
  • D: 0.149
• predicted transmembrane helices (TMHMM): 0

⊟Accession numbers

• GI: 15926347 NCBI
• RefSeq: NP_373880 NCBI
• UniProt: A0A0H3JP31 UniProt

⊟Protein sequence

• MQYVVPKGTIFASSIEISNTYSLVGCMCQPAFEFKQFELFKQSELITQYPHLKSVIEKYALK

⊟Experimental data

• experimentally validated: no data available

⊟Expression & Regulation

⊟Operon

• MicrobesOnline: SA0625 no polycistronic organisation predicted

⊟Regulation

• sigma factor:
• regulator:

⊟Transcription pattern

• S.aureus Expression Data Browser: no data available

⊟Protein synthesis (provided by Aureolib)

• Aureolib: no data available

⊟Protein stability

• half-life: no data available

⊟Other Information

You are kindly invited to share additional interesting facts.