NCBI: 26-AUG-2013

⊟Summary

• organism: Staphylococcus aureus N315
• locus tag: SA1768 [new locus tag: SA_RS10170 ]
• pan locus tag^?: SAUPAN005055000
• symbol: SA1768
• pan gene symbol^?: —
• synonym:
• product: hypothetical protein

⊟Gene

⊟General

• type: CDS
• locus tag: SA1768 [new locus tag: SA_RS10170 ]
• symbol: SA1768
• product: hypothetical protein
• replicon: chromosome
• strand: -
• coordinates: 2024201..2024845
• length: 645
• essential: no DEG

⊟Accession numbers

• Gene ID: 1124657 NCBI
• RefSeq: NP_375066 NCBI
• MicrobesOnline: 104092 MicrobesOnline

⊟Phenotype

Share your knowledge and add information here. [edit]

⊟DNA sequence

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  ATGGCAGTAAAACATGCAAGTGCGCCAAAGGCGTATATTAACATTACTGGTTTAGGTTTC
  GCTAAATTAACGAAAGAAGGCGCGGAATTAAAATATAGTGATATTACAAAAACAAGAGGA
  TTACAAAAAATTGGTGTTGAAACTGGTGGAGAACTAAAAACAGCTTATGCTGATGGCGGT
  CCAATTGAATCAGGGAATACAGACGGAGAAGGTAAAATCTCATTACAAATGCATGCGTTC
  CCTAAAGAGATTCGCAAAATTGTTTTTAATGAAGATTATGATGAAGATGGCGTTTACGAA
  GAGAAACAAGGTAAACAAAACAATTACGTAGCTGTATGGTTCAGACAAGAGCGTAGAGAC
  GGTACATTTAGAACAGTTTTATTACCTAAAGTTATGTTTACAAATCCTAAAATCGATGGA
  GAAACGGCTGAGAAAGATTGGGATTTCTCAAGTGAAGAGGTTGAAGGTGAGGCACTTTTC
  CCTTTAGTTGATAATAAAAAGTCAGTACGTAAGTATATCTTTGATTCAGCTAACATGACA
  AATCATGATGGAGACGGTGAAAAAGGCGAAGAGGCTTTCTTAAAGAAAATTTTAGGCGAA
  GAATATACTGGAAACGTGACAGAGGGTAACGAAGAAACTTTGTAA
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⊟Protein

⊟General

• locus tag: SA1768 [new locus tag: SA_RS10170 ]
• symbol: SA1768
• description: hypothetical protein
• length: 214
• theoretical pI: 4.64117
• theoretical MW: 23889.4
• GRAVY: -0.750935

⊟Function

• TIGRFAM:
  Genetic information processingMobile and extrachromosomal element functionsProphage functionsphage major tail protein, phi13 family (TIGR01603; HMM-score: 225)
• TheSEED:  
  Phage protein 
• PFAM:

⊟Structure, modifications & interactions

• domains:
• modifications:
• cofactors:
• effectors:
• protein partners:

⊟Localization

• PSORTb: unknown (no significant prediction)
  • Cytoplasmic Score: 2.5
  • Cytoplasmic Membrane Score: 2.5
  • Cellwall Score: 2.5
  • Extracellular Score: 2.5
  • Internal Helices: 0
• LocateP: Intracellular
  • Prediction by SwissProt Classification: Cytoplasmic
  • Pathway Prediction: No pathway
  • Intracellular Possibility: 1
  • Signal Peptide Possibility: -1
  • N-terminally Anchored Score: 1
  • Predicted Cleavage Site: No CleavageSite
• SignalP: no predicted signal peptide
  • Ymax: 0.172
  • Ymax_pos: 29
  • Cmax: 0.151
  • Cmax_pos: 29
  • Smax: 0.294
  • Smax_pos: 19
  • Smean: 0.206
  • D: 0.186
• predicted transmembrane helices (TMHMM): 0

⊟Accession numbers

• GI: 15927533 NCBI
• RefSeq: NP_375066 NCBI
• UniProt: A0A0H3JLV9 UniProt

⊟Protein sequence

• MAVKHASAPKAYINITGLGFAKLTKEGAELKYSDITKTRGLQKIGVETGGELKTAYADGGPIESGNTDGEGKISLQMHAFPKEIRKIVFNEDYDEDGVYEEKQGKQNNYVAVWFRQERRDGTFRTVLLPKVMFTNPKIDGETAEKDWDFSSEEVEGEALFPLVDNKKSVRKYIFDSANMTNHDGDGEKGEEAFLKKILGEEYTGNVTEGNEETL

⊟Experimental data

• experimentally validated: no data available

⊟Expression & Regulation

⊟Operon

• MicrobesOnline: SA1768 < SA1769 < SA1770 < SA1771 < SA1772 < SA1773 < SA1774 < SA1775 < SA1776 < SA1777 < SA1778

⊟Regulation

• sigma factor:
• regulator:

⊟Transcription pattern

• S.aureus Expression Data Browser: no data available

⊟Protein synthesis (provided by Aureolib)

• Aureolib: no data available

⊟Protein stability

• half-life: no data available

⊟Other Information

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