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NCBI: 10-JUN-2013

Summary[edit | edit source]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL1776 [new locus tag: SACOL_RS09090 ]
  • pan locus tag?: SAUPAN004386000
  • symbol: SACOL1776
  • pan gene symbol?: plsC
  • synonym:
  • product: 1-acyl-sn-glycerol-3-phosphate acyltransferase

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: SACOL1776 [new locus tag: SACOL_RS09090 ]
  • symbol: SACOL1776
  • product: 1-acyl-sn-glycerol-3-phosphate acyltransferase
  • replicon: chromosome
  • strand: -
  • coordinates: 1816469..1817086
  • length: 618
  • essential: unknown other strains

Accession numbers[edit | edit source]

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGTATTCAGTGATTAGTAAGATTTTGAATTTCATTTTAGTTAAAATGTCAAAATCATTA
    TACGTAATCGGTAAAGATAATATTCCTAAGGATAGTAAATATGTCGTAACTTGTACGCAT
    GAAAGTTATAACGAAGTCATTATGCTAGGTATGGCATTATATCCTAATCAAATTCATTAT
    ATGGCTAAAAAAGAATTATTCAAAAATAAATGGATTGGTAAATTTTTAACGTCTTTAAAT
    GCATTTCCTGTAGATCGTGAAAATCCAGGACCTAGTACTTTAAAACGCCCAATCAATTTG
    TTGAAAGATAATAAGACAGTTGGTATCTTCCCAACAGGTTCTCGCACATCGCAAGAAGGT
    GCACCTTTGAAACGTGGTGCTTCAACAATTGCAATGTTAAGTAAGTCACCAATATTACCT
    GTTGCTTATGTTGGTCCTACTAAGATTCACGGTCTTTTAACAGGACAAGCATACATAAAT
    ATTGGCAAACCAATCGATATTAACGATTTACCTAAAGATTTAAAACGAAACGAGCGTATC
    GATTATATTACAAAAGAGATTGAAACACGAACAGCAAAGTTACAACAAGAATTGCATGAA
    ATTGTAAAAAGTTTATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    618

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SACOL1776 [new locus tag: SACOL_RS09090 ]
  • symbol: SACOL1776
  • description: 1-acyl-sn-glycerol-3-phosphate acyltransferase
  • length: 205
  • theoretical pI: 10.227
  • theoretical MW: 23073.9
  • GRAVY: -0.245854

Function[edit | edit source]

  • TIGRFAM:
    Metabolism Fatty acid and phospholipid metabolism Biosynthesis 1-acylglycerol-3-phosphate O-acyltransferases (TIGR00530; EC 2.3.1.51; HMM-score: 99.1)
  • TheSEED  :
    • 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
    Fatty Acids, Lipids, and Isoprenoids Phospholipids Glycerolipid and Glycerophospholipid Metabolism in Bacteria  1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
    and 1 more
    Phosphorus Metabolism Phosphorus Metabolism - no subcategory Phosphate metabolism  1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
  • PFAM:
    Acyltransferase (CL0228) Acyltransferase; Acyltransferase (PF01553; HMM-score: 72.6)

Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP: Intracellular
    • Prediction by SwissProt Classification: Cytoplasmic
    • Pathway Prediction: No pathway
    • Intracellular possibility: 1
    • Signal peptide possibility: -1
    • N-terminally Anchored Score: 1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.051613
    • TAT(Tat/SPI): 0.000379
    • LIPO(Sec/SPII): 0.012932
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit | edit source]

Protein sequence[edit | edit source]

  • MYSVISKILNFILVKMSKSLYVIGKDNIPKDSKYVVTCTHESYNEVIMLGMALYPNQIHYMAKKELFKNKWIGKFLTSLNAFPVDRENPGPSTLKRPINLLKDNKTVGIFPTGSRTSQEGAPLKRGASTIAMLSKSPILPVAYVGPTKIHGLLTGQAYINIGKPIDINDLPKDLKRNERIDYITKEIETRTAKLQQELHEIVKSL

Experimental data[edit | edit source]

  • experimentally validated: PeptideAtlas
  • protein localization: Cytoplasmic [1] [2] [3]
  • quantitative data / protein copy number per cell:
  • interaction partners:

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]

Protein synthesis (provided by Aureolib)[edit | edit source]

Protein stability[edit | edit source]

  • half-life: 12.48 h [4]

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

  1. Dörte Becher, Kristina Hempel, Susanne Sievers, Daniela Zühlke, Jan Pané-Farré, Andreas Otto, Stephan Fuchs, Dirk Albrecht, Jörg Bernhardt, Susanne Engelmann, Uwe Völker, Jan Maarten van Dijl, Michael Hecker
    A proteomic view of an important human pathogen--towards the quantification of the entire Staphylococcus aureus proteome.
    PLoS One: 2009, 4(12);e8176
    [PubMed:19997597] [WorldCat.org] [DOI] (I e)
  2. Kristina Hempel, Florian-Alexander Herbst, Martin Moche, Michael Hecker, Dörte Becher
    Quantitative proteomic view on secreted, cell surface-associated, and cytoplasmic proteins of the methicillin-resistant human pathogen Staphylococcus aureus under iron-limited conditions.
    J Proteome Res: 2011, 10(4);1657-66
    [PubMed:21323324] [WorldCat.org] [DOI] (I p)
  3. Andreas Otto, Jan Maarten van Dijl, Michael Hecker, Dörte Becher
    The Staphylococcus aureus proteome.
    Int J Med Microbiol: 2014, 304(2);110-20
    [PubMed:24439828] [WorldCat.org] [DOI] (I p)
  4. Stephan Michalik, Jörg Bernhardt, Andreas Otto, Martin Moche, Dörte Becher, Hanna Meyer, Michael Lalk, Claudia Schurmann, Rabea Schlüter, Holger Kock, Ulf Gerth, Michael Hecker
    Life and death of proteins: a case study of glucose-starved Staphylococcus aureus.
    Mol Cell Proteomics: 2012, 11(9);558-70
    [PubMed:22556279] [WorldCat.org] [DOI] (I p)

Relevant publications[edit | edit source]