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NCBI: 10-JUN-2013

Summary[edit source | edit]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL2599 [new locus tag: SACOL_RS13605 ]
  • pan locus tag?: SAUPAN006261000
  • symbol: SACOL2599
  • pan gene symbol?:
  • synonym:
  • product: hypothetical protein

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SACOL2599 [new locus tag: SACOL_RS13605 ]
  • symbol: SACOL2599
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 2659404..2660723
  • length: 1320
  • essential: unknown other strains

Accession numbers[edit source | edit]

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGAGAACTGGGCATTATACGCCCATACCTAATGAACCTCATTATTTGGTTATTAGTCAT
    GCGGATAAACTTACCGCAACAGAAAAAGCGAAATTAAGATTATTAATCATAAAACAGAAA
    TTAGATATTTCATTGGCAGAAAGTGTAGTTTCTTCGCCTATAGCGAGTGAACATGTGATA
    GAACAATTGACACTATTTCAACATGAGCGACGACATTTAAGACCTAAAATAAGTGCGACA
    TTTTTAGCCTGGTTGTTGATATTTTTAATGTTTGCATTGCCAATCGGTATCGCTTATCAA
    TTTTCAGATTGGTTTCAAAATCAGTATGTGTCAGCATGGATAGAATATTTAACTCAAACA
    ACATTGCTCAATCACGATATATTACAGCATATATTATTTGGTGATTATGGTGTGCTATCA
    CTTGGAACATATTCGCTCGTATGGGCATTGCCGGTTGTAATATTGATTAGTTTATCAACT
    GCTATAATTGATCAAACAGGACTCAAATCATGGATGATATGGGCAATTGAACCGTCAATG
    TTATGGATAGGATTACAAGGTAATGATATCGTGCCACTATTAGAAGGGTTTGGATGTAAT
    GCAGCAGCTATTTCACAAGCAGCACACCAATGCCATACCTGCACGAAGACACAGTGTATG
    AGTTTAATAAGCTTTGGTAGTTCTTGTAGTTATCAAATAGGTGCGACATTATCTATTTTT
    AGTGTAGCTGGAAAGTCATGGCTATTTATGCCGTACTTAATATTAGTACTTTTAGGTGGC
    ATCTTACATAATAGGATATGGTTGAAAAAGAATGATCAACAACTTAGCGTTCCGCTACCT
    TATGATAGGCAATTACATATGCCAAATATACGTCAAATGTTGCTACAAATGTGGCAAAAT
    ATACAAATGTTTATCGTTCAAGCGCTACCTATTTTTATCACAATCTGTCTTATTGTTAGT
    ATTTTATCACTAACGCCAATTTTGAATGTTTTATCACAAATATTTACACCTATATTATCG
    TTATTAGGCATCTCGTCAGAATTGTCACCAGGGATTTTATTTTCAATGATTCGAAAAGAC
    GGCATGCTCTTGTTTAATTTGCATCAGGGCGCCTTATTACAAGGAATGACAGCAACACAG
    TTACTACTACTTGTGTTTTTTAGTTCAACATTTACAGCGTGCTCGGTCACAATGACGATG
    CTTTTGAAACATTTAGGTGGTCAGTCAGCACTAAAATTAATTGGAAAGCAAATGGTGACA
    TCATTGTCTTTAGTTATTGGTGTAGGCATCATTGTTAAAATAGTAATGCTGATTATTTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SACOL2599 [new locus tag: SACOL_RS13605 ]
  • symbol: SACOL2599
  • description: hypothetical protein
  • length: 439
  • theoretical pI: 8.65265
  • theoretical MW: 48999.2
  • GRAVY: 0.64738

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    MetabolismTransport and binding proteinsCations and iron carrying compoundsferrous iron transport protein B (TIGR00437; HMM-score: 79.4)
  • TheSEED:  
    CBSS-196620.1.peg.2477 Ferrous iron transport protein B 
  • PFAM:
    no clan definedGate; Nucleoside recognition (PF07670; HMM-score: 46.4)
    Phage_holin_3_7; Putative 3TM holin, Phage_holin_3 (PF05449; HMM-score: 16.2)
    Bunya_G2; Bunyavirus glycoprotein G2 (PF03563; HMM-score: 13.8)
    FeoB_C; Ferrous iron transport protein B C terminus (PF07664; HMM-score: 12.4)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 8
  • LocateP: Multi-transmembrane
    • Prediction by SwissProt Classification: Membrane
    • Pathway Prediction: Sec-(SPI)
    • Intracellular Possibility: 0.17
    • Signal Peptide Possibility: -1
    • N-terminally Anchored Score: 1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • Ymax: 0.138
    • Ymax_pos: 53
    • Cmax: 0.146
    • Cmax_pos: 22
    • Smax: 0.265
    • Smax_pos: 45
    • Smean: 0.108
    • D: 0.126
  • predicted transmembrane helices (TMHMM): 8

Accession numbers[edit source | edit]

Protein sequence[edit source | edit]

  • MRTGHYTPIPNEPHYLVISHADKLTATEKAKLRLLIIKQKLDISLAESVVSSPIASEHVIEQLTLFQHERRHLRPKISATFLAWLLIFLMFALPIGIAYQFSDWFQNQYVSAWIEYLTQTTLLNHDILQHILFGDYGVLSLGTYSLVWALPVVILISLSTAIIDQTGLKSWMIWAIEPSMLWIGLQGNDIVPLLEGFGCNAAAISQAAHQCHTCTKTQCMSLISFGSSCSYQIGATLSIFSVAGKSWLFMPYLILVLLGGILHNRIWLKKNDQQLSVPLPYDRQLHMPNIRQMLLQMWQNIQMFIVQALPIFITICLIVSILSLTPILNVLSQIFTPILSLLGISSELSPGILFSMIRKDGMLLFNLHQGALLQGMTATQLLLLVFFSSTFTACSVTMTMLLKHLGGQSALKLIGKQMVTSLSLVIGVGIIVKIVMLII

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

Regulation[edit source | edit]

  • sigma factor:
  • regulator: SACOL1611 (Zur*)
    Zur* (TF) important in Zinc homeostasis

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]