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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS00155 [old locus tag: SACOL0026 ]
  • pan locus tag?: SAUPAN000041000
  • symbol: SACOL_RS00155
  • pan gene symbol?:
  • synonym:
  • product: hypothetical protein

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SACOL_RS00155 [old locus tag: SACOL0026 ]
  • symbol: SACOL_RS00155
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 34411..35667
  • length: 1257
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_002951 (34411..35667) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGATAGACAACTTTATGCAGGTCCTTAAATTAATTAAAGAGAAACGTACCAATAATGTA
    GTTAAAAAATCTGATTGGGATAAAGGTGATCTATATAAAACTTTAGTCCATGATAAGTTA
    CCCAAGCAGTTAAAAGTGCATATAAAAGAAGATAAATATTCAGTTGTAGGGAAGGTTGCT
    ACTGGGAACTATAGTAAAGTTCCTTGGATTTCAATATATGATGAGAATATAACAAAAGAA
    ACAAAGGATGGATATTATTTGGTATATCTTTTTCATCCGGAAGGAGAAGGCATATACTTA
    TCTTTGAATCAAGGATGGTCAAAGATAAGTGATATGTTTCCGCGGGATAAAAATGCTGCA
    AAACAAAGAGCATTAACTTTATCTTCCGAACTCAATAAATATATTACATCAAATGAATTT
    AATACTGGAAGATTTTATTACGCAGAAAATAAAGATTCATCTTATGATTTAAAAAATGAT
    TATCCATCAGGATATTCTCATGGATCAATAAGATTCAAATATTATGATTTGAATGAAGGA
    TTCACAGAAGAAGATATGCTAGAGGATTTAAAGAAATTTTTAGAACTATTTAATGAATTA
    GCTTCAAAAGTTACAAAAACATCCTATGATAGCTTGGTCAATAGCATAGACGAAATACAG
    GAAGACAGCGAAATTGAAGAAATTAGAACAGCACAAAAAGATAAGACACTCAAGGAAGTG
    GAAGCACCTAAAGGAATAATTCCAAAATATAAAAAAGGTGTATCAAAGACTACTAAAAAT
    GATTCAGAAATTGAAAAATCAAATAAAGAGAATAAATTAACCGGTAAAGTTGGAGAAAAA
    TTAGCGCTAAATTACTTTAATGAGCTAATTGATAATAAAATAGACGAAGATAAGAAAGAA
    CAGTTTAGGAATATTTTAAATGATAATCCAGGCTCTCAACACGGTCATGGCTATGATTTA
    GTAGCTTTTGATCCAACAAATACAGATAAAGCTGTAGAAAAATTTATTGAAATTAAAACA
    TCTACATCTTCTAGTATTGAGGAACCATTTTTTATGTCGCTAAATGAAATGTTTGCTATG
    AAAGAATATAAGCAGAAATATTTAATATTAAGAATATTTAATGTTTCCGGTAAAGAACCA
    CAATTTTATTTTATAGATCCATATGCAAATTATTCTGAATTTAAAGATGTAGATGATCTC
    ATTGACAAAGTATTTAATGTAGAAGCTATTCAGTATAAAGTTTTTGGCGAAAAATGA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1257

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SACOL_RS00155 [old locus tag: SACOL0026 ]
  • symbol: SACOL_RS00155
  • description: hypothetical protein
  • length: 418
  • theoretical pI: 5.32851
  • theoretical MW: 48642.4
  • GRAVY: -0.775359

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
  • TheSEED:
  • PFAM:
    no clan definedDUF3578; Domain of unknown function (DUF3578) (PF12102; HMM-score: 179.1)
    PDDEXK (CL0236) DUF3883; Domain of unknown function (DUF3883) (PF13020; HMM-score: 63.9)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.163
    • Ymax_pos: 14
    • Cmax: 0.107
    • Cmax_pos: 23
    • Smax: 0.32
    • Smax_pos: 4
    • Smean: 0.265
    • D: 0.202
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

  • GI: 446488816 NCBI
  • RefSeq: WP_000566670 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MIDNFMQVLKLIKEKRTNNVVKKSDWDKGDLYKTLVHDKLPKQLKVHIKEDKYSVVGKVATGNYSKVPWISIYDENITKETKDGYYLVYLFHPEGEGIYLSLNQGWSKISDMFPRDKNAAKQRALTLSSELNKYITSNEFNTGRFYYAENKDSSYDLKNDYPSGYSHGSIRFKYYDLNEGFTEEDMLEDLKKFLELFNELASKVTKTSYDSLVNSIDEIQEDSEIEEIRTAQKDKTLKEVEAPKGIIPKYKKGVSKTTKNDSEIEKSNKENKLTGKVGEKLALNYFNELIDNKIDEDKKEQFRNILNDNPGSQHGHGYDLVAFDPTNTDKAVEKFIEIKTSTSSSIEEPFFMSLNEMFAMKEYKQKYLILRIFNVSGKEPQFYFIDPYANYSEFKDVDDLIDKVFNVEAIQYKVFGEK

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • SACOL_RS00155 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]