From AureoWiki
Jump to navigation Jump to search
COLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

NCBI: 02-MAR-2017

Summary[edit | edit source]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS03400
  • pan locus tag?:
  • symbol: SACOL_RS03400
  • pan gene symbol?:
  • synonym:
  • product: N-acetyltransferase

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: SACOL_RS03400
  • symbol: SACOL_RS03400
  • product: N-acetyltransferase
  • replicon: chromosome
  • strand: +
  • coordinates: 686084..686560
  • length: 477
  • essential: unknown

Accession numbers[edit | edit source]

  • Location: NC_002951 (686084..686560) NCBI
  • BioCyc: G1G4B-706 BioCyc
  • MicrobesOnline:

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    ATGTTCAAGGTAAGACAAGCAACTGAAAAAGATGTTGTTCAAATTAGAGATGTCGCAACT
    AAAGCTTGGTTTAATACATACTTAAATATATACGCTGCGACAACAGTTAATCACTTGTTA
    GAAGCTTCATATAATGAACATCATTTAAAGAAAAGACTTCAAGAACAATTATTCTTAGTC
    GTTGAAGAAGGTAATGACATCGTTGGCTTTGCTAACTTTATTTACGGTGAAGAATTATAT
    TTATCAGCTCATTATGTTAAACCAGAATCGCAACATACAGGTTATGGTACAGCATTGTTA
    AATGAAGGATTATCACGTTTTGAAGATAAATTTGAAGGTGTTTACTTAGAAGTAGATAAT
    AAAAATGAAGAAGCAGTAGCTTACTATAAAGAGCAAGGTTTTACAATCTTACGCTCTTAT
    GAGCCAGAAATGTATGGCGAAAAGTTAGACTTAGCACTTATGTACAAAGCATTTTAA
    60
    120
    180
    240
    300
    360
    420
    477

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SACOL_RS03400
  • symbol: SACOL_RS03400
  • description: N-acetyltransferase
  • length: 158
  • theoretical pI: 4.77388
  • theoretical MW: 18414.6
  • GRAVY: -0.403797

Function[edit | edit source]

  • TIGRFAM:
    Genetic information processing Protein synthesis Ribosomal proteins: synthesis and modification ribosomal-protein-alanine acetyltransferase (TIGR01575; EC 2.3.1.128; HMM-score: 46.2)
    and 3 more
    Metabolism Biosynthesis of cofactors, prosthetic groups, and carriers Glutathione and analogs mycothiol synthase (TIGR03448; EC 2.3.1.189; HMM-score: 26)
    UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase (TIGR03585; EC 2.3.1.202; HMM-score: 24.6)
    GNAT-family acetyltransferase TIGR03103 (TIGR03103; HMM-score: 13.4)
  • TheSEED:
  • PFAM:
    Acetyltrans (CL0257) Acetyltransf_1; Acetyltransferase (GNAT) family (PF00583; HMM-score: 52)
    Acetyltransf_10; Acetyltransferase (GNAT) domain (PF13673; HMM-score: 51.4)
    and 7 more
    Acetyltransf_7; Acetyltransferase (GNAT) domain (PF13508; HMM-score: 41.3)
    Acetyltransf_4; Acetyltransferase (GNAT) domain (PF13420; HMM-score: 20.2)
    FR47; FR47-like protein (PF08445; HMM-score: 17.2)
    Acetyltransf_3; Acetyltransferase (GNAT) domain (PF13302; HMM-score: 15.5)
    Acetyltransf_9; Acetyltransferase (GNAT) domain (PF13527; HMM-score: 14.1)
    Thioredoxin (CL0172) Thioredoxin_8; Thioredoxin-like (PF13905; HMM-score: 13.2)
    Acetyltrans (CL0257) Acetyltransf_8; Acetyltransferase (GNAT) domain (PF13523; HMM-score: 12.4)

Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

Localization[edit | edit source]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.005808
    • TAT(Tat/SPI): 0.000603
    • LIPO(Sec/SPII): 0.000895
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit | edit source]

  • GI: 446399649 NCBI
  • RefSeq: WP_000477504 NCBI
  • UniProt:

Protein sequence[edit | edit source]

  • MFKVRQATEKDVVQIRDVATKAWFNTYLNIYAATTVNHLLEASYNEHHLKKRLQEQLFLVVEEGNDIVGFANFIYGEELYLSAHYVKPESQHTGYGTALLNEGLSRFEDKFEGVYLEVDNKNEEAVAYYKEQGFTILRSYEPEMYGEKLDLALMYKAF

Experimental data[edit | edit source]

  • experimentally validated:
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]

Protein synthesis (provided by Aureolib)[edit | edit source]

Protein stability[edit | edit source]

  • half-life: no data available

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]