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04-0298108BA0217611819-9771193COLECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50N315NCTC8325NewmanRF122ST398T0131TCH60TW20USA300_FPR3757USA300_TCH1516VC40
NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS05180
  • pan locus tag?:
  • symbol: SACOL_RS05180
  • pan gene symbol?:
  • synonym:
  • product: sodium:proton antiporter

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS, pseudogene
  • locus tag: SACOL_RS05180
  • symbol: SACOL_RS05180
  • product: sodium:proton antiporter
  • replicon: chromosome
  • strand: +
  • coordinates: 1021519..1023363
  • length: 1845
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_002951 (1021519..1023363) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGGAGTTTTTATCTTTAGTTATTGTTGTTTTAGCAGCGTTTTTAACTCCAATAATTGTC
    AATCGATTAAATATTAATTTCTTGCCAGTTGTTGTTGCAGAAATTTTGATGGGGATTGTG
    ATTGGAAATTCATTTCTAAATATAGTAGAAAGGGATTCAATTCTAAATATTTTATCAACG
    TTAGGCTTTATCTTTTTAATGTTTTTAAGTGGTTTAGAAATTGATTTTAAAGCTTTTAAA
    AAAGATAAACGCGCACGTCAAGGACAAAATGATGATGAATCCTCAATTCCAGGGCATCTT
    AATCTAGCGTTAACTGTATTTGCATTTATTATGATTATTTCGATTCTTTTAGCGTATGTA
    TTTAAATGGCTTGGATTAGTGGATGATGTGTTATTAATGGTCATTATCATTTCAACTATT
    TCCTTAGGCGTAGTTGTTCCAACTTTAAAAGAAATGAATATTATGAGAACAACTATAGGG
    CAATTTATCCTATTAGTAGCAGTACTTGCGGACTTAGTAACTATGATTTTATTAACGGTC
    TATGGCGCAATCAATGGTCAAGGCGGCAGTACAATATGGTTAATAGGTATATTAGTTGTT
    TTCACAGCAATTTCATATATTTTAGGTGTTCAATTTAAAAGAATGTCATTTTTACAAAAA
    TTGATGGATGGTACGACGCAAATCGGTATTCGTGCGGTATTTGCATTAATAATATTATTA
    GTAGCCCTAGCAGAGGGAGTTGGCGCAGAAAATATATTAGGTGCATTCTTAGCAGGTGTC
    GTTGTTTCATTATTAAATCCAGATGAAGAAATGGTTGAAAAGTTAGACTCATTTGGTTAT
    GGGTTCTTTATTCCTATTTTCTTTATAATGGTTGGTGTAGATTTAAACATACCTTCATTA
    ATTAAAGAACCGAAATTACTAATTATCATACCGATTTTAATCGTTGCATTTATCATTTCA
    AAATTAATTCCAGTCATGTTTATTCGACGTTGGTTTGATATGAAAACAACGATTGCATCA
    GCATTTTTATTAACATCAACATTATCGCTCGTGATAGCTGCAGCCAAAATTTCAGAAAGA
    TTAAATGCTATTTCAGCTGAAACGTCAGGTATATTAATTTTAAGCGCAGTCATTACATGT
    GTATTCGTTCCGATTATTTTCAAAAAACTGTTTCCAGTTCCAGATGAGTTTAACCGTAAA
    ATTGAAGTTAGTTTAATTGGTAAAAATCAATTAACGATTCCTATAGCGCAAAATTTAACA
    TCTCAGTTATATGACGTGACATTATATTATCGCAAAGACTTGAGTGATCGTCGTCAATTG
    TCAGATGATATCACGATGATATAAATTGCTGATTATGAACAAGATGTTTTAGAACGACTA
    GGTCTGTTTGACCGAGACATAGTTGTTTGTGCTACGAATGACGATGATATTAACCGAAAA
    GTTGCTAAATTAGCCAAAGCACATCAAGTTGAGCGTGTCATTTGCAGACTTGAAAGCACA
    ACGGACGATACAGAGTTAGTTGATTCAGGTATTGAAATTTTCAGTAGCTACTTAAGTAAT
    AAAATCTTATTAAAAGGTTTAATTGAAACACCTAACATGTTGAATTTATTAAGTAATGTT
    GAAACGTCACTATATGAAATTCAAATGTTAAATTATAAATATGAAAATATTCAATTACGT
    AATTTCCCATTCGGAGGAGACATCATCTTCGTGCGTATTATCCGTAATAATGAGTCGATT
    GTTCCGCATGGAGATACACAATTGCGATATGGAGATCGCTTAATTGTTACCGGTGCTAAA
    GAATACGTTGATGAATTGAAGCAAGAGTTAGAATTTTATTTTTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1380
    1440
    1500
    1560
    1620
    1680
    1740
    1800
    1845

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SACOL_RS05180
  • symbol: SACOL_RS05180
  • description: sodium:proton antiporter
  • length: 0
  • theoretical pI:
  • theoretical MW:
  • GRAVY:

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
  • TheSEED:
  • PFAM:

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb:
  • LocateP:
  • SignalP:
  • predicted transmembrane helices (TMHMM):

Accession numbers[edit source | edit]

  • GI:
  • RefSeq:
  • UniProt:

Protein sequence[edit source | edit]

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • SACOL_RS05180 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]