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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS06965 [old locus tag: SACOL1368 ]
  • pan locus tag?: SAUPAN003707000
  • symbol: SACOL_RS06965
  • pan gene symbol?: katA
  • synonym:
  • product: catalase

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SACOL_RS06965 [old locus tag: SACOL1368 ]
  • symbol: SACOL_RS06965
  • product: catalase
  • replicon: chromosome
  • strand: +
  • coordinates: 1373800..1375317
  • length: 1518
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_002951 (1373800..1375317) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
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    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGTCACAACAAGACAAAAAGTTAACTGGTGTTTTTGGGCATCCAGTATCAGACCGAGAA
    AATAGTATGACAGCAGGGCCTAGGGGACCTCTTTTAATGCAAGATATTTACTTTTTAGAG
    CAAATGTCTCAATTTGATAGAGAAGTAATACCAGAACGTCGAATGCATGCCAAAGGTTCT
    GGTGCATTTGGGACATTTACTGTAACTAAAGATATAACAAAATATACGAATGCTAAAATA
    TTCTCTGAAATAGGTAAGCAAACCGAAATGTTTGCCCGTTTCTCTACTGTAGCAGGAGAA
    CGTGGTGCTGCTGATGCGGAGCGTGACATTCGAGGATTTGCGTTAAAGTTCTACACTGAA
    GAAGGGAACTGGGATTTAGTAGGGAATAACACACCAGTATTCTTCTTTAGAGATCCAAAG
    TTATTTGTTAGTTTAAATCGTGCGGTGAAACGAGATCCTAGAACAAATATGAGAGATGCA
    CAAAATAACTGGGATTTCTGGACGGGTCTTCCAGAAGCATTGCACCAAGTAACGATCTTA
    ATGTCAGATAGAGGGATTCCTAAAGATTTACGTCATATGCATGGGTTCGGTTCTCACACA
    TACTCTATGTATAATGATTCTGGTGAACGTGTTTGGGTTAAATTCCATTTTAGAACGCAA
    CAAGGTATTGAAAACTTAACTGATGAAGAAGCTGCTGAAATTATAGCTACAGATCGTGAT
    TCATCTCAACGCGATTTATTCGAAGCCATTGAAAAAGGTGATTATCCAAAATGGACAATG
    TATATTCAAGTAATGACTGAGGAACAAGCTAAAAACCATAAAGATAATCCATTTGATTTA
    ACAAAAGTATGGTATCACGATGAGTATCCTCTAATTGAAGTTGGAGAGTTTGAATTAAAT
    AGAAATCCAGATAATTACTTTATGGATGTTGAACAAGCTGCGTTTGCACCAACTAATATT
    ATTCCAGGATTAGATTTTTCTCCAGACAAAATGCTGCAAGGGCGTTTATTCTCATATGGC
    GATGCGCAAAGATATCGATTAGGAGTTAATCATTGGCAGATTCCTGTAAACCAACCTAAA
    GGTGTTGGTATTGAAAATATTTGTCCTTTTAGTAGAGATGGTCAAATGCGCGTAGTTGAC
    AATAACCAAGGTGGAGGAACACATTATTATCCAAATAACCATGGTAAATTTGATTCTCAA
    CCTGAATATAAAAAGCCACCATTCCCAACTGATGGATACGGCTATGAATATAATCAACGT
    CAAGATGATGATAATTATTTTGAACAACCAGGTAAATTGTTTAGATTACAATCAGAGGAC
    GCTAAAGAAAGAATTTTTACAAATACAGCAAATGCAATGGAAGGCGTAACGGATGATGTT
    AAACGACGTCATATTCGTCATTGTTACAAAGCTGACCCAGAATATGGTAAAGGTGTTGCA
    AAAGCATTAGGTATTGATATAAATTCTATTGATCTTGAAACTGAAAATGATGAAACATAC
    GAAAACTTTGAAAAATAA
    60
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    1260
    1320
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    1518

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SACOL_RS06965 [old locus tag: SACOL1368 ]
  • symbol: SACOL_RS06965
  • description: catalase
  • length: 505
  • theoretical pI: 5.13252
  • theoretical MW: 58379.5
  • GRAVY: -0.845743

Function[edit source | edit]

  • reaction:
    EC 1.11.1.6?  ExPASy
    Catalase2 H2O2 = O2 + 2 H2O
  • TIGRFAM:
  • TheSEED:
  • PFAM:
    no clan definedCatalase; Catalase (PF00199; HMM-score: 607)
    Catalase-rel; Catalase-related immune-responsive (PF06628; HMM-score: 80.3)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors: heme
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 9.97
    • Cytoplasmic Membrane Score: 0
    • Cellwall Score: 0.01
    • Extracellular Score: 0.02
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.114
    • Ymax_pos: 11
    • Cmax: 0.107
    • Cmax_pos: 25
    • Smax: 0.173
    • Smax_pos: 2
    • Smean: 0.115
    • D: 0.114
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

  • GI: 446004684 NCBI
  • RefSeq: WP_000082539 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MSQQDKKLTGVFGHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNWDFWTGLPEALHQVTILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTDEEAAEIIATDRDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYNQRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEGVTDDVKRRHIRHCYKADPEYGKGVAKALGIDINSIDLETENDETYENFEK

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • SACOL_RS06965 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]