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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS10185 [old locus tag: SACOL1947 ]
  • pan locus tag?: SAUPAN004907000
  • symbol: SACOL_RS10185
  • pan gene symbol?:
  • synonym:
  • product: membrane protein

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SACOL_RS10185 [old locus tag: SACOL1947 ]
  • symbol: SACOL_RS10185
  • product: membrane protein
  • replicon: chromosome
  • strand: +
  • coordinates: 2009205..2010191
  • length: 987
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_002951 (2009205..2010191) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGAACGATCAATGGTATAAACATTTAATTGGTGCCAGAACAATTAAAACTGGTATTGCC
    ATTTTTTTAACAGCTGTCTTTTGTATGGCACTAGATTTAACACCCATCTATGCCATTTTA
    ACAGCTGTAGTCACAATTGAACCAACTGCCAAGGCATCACTTATTAAAGGTTATCGTAGA
    TTACCTGCTACGGTAATTGGTGCAGGCTTTGCAGTATTATTTACATATTTATTCGGCGAT
    CAATCACCTTTTACATATGCATTGAGTGCAACGTTCACGATTTTATTCTGTACAAAACTC
    AAATTGCAAGTTGGTACGAATGTCGCTGTACTAACATCATTAGCTATGATTCCAGGTATT
    CATGATGCCTACATATTCAACTTTTTGTCTCGAACATTGACAGCAATTATTGGACTCGTG
    ACATCAGGTTTAATTAACTTCATGGTGTTTCCACCTAAGTATTATGGTCAGGTCGAAGAA
    AAATTAAGTAAGACAGATGCCTTGATGTATAAATTATTTTACAATCGCTGCCAAGAACTT
    ATCTTATCAAGACTGCAATCTGATAAAAGCGAAAAAGCATATAAAAATATTTTCAATTTA
    AATAATCAAGTTGAAACGTTAATAAGTTATCAACGTGATGAATTAAGCTATCATAAGAAA
    AAAGAATGTGATTGGAAATTACTCAATCAATTAACTAAACGTGCATATACGAATCGTTTG
    TTTATCACTCATTTATCAAATATCATTTACTTGCCTAAAAATACTCGTGTTAACTTTTCA
    GGTGACGAAAAAATGGCATTGCTAAAAATTAGTAGTAGCATCAAAGATATATTTTATGAT
    GGTTCTTTTAAGAGAGAAGATGATTCTGTAGAAACTTTACGTTCGACTATAAAAGCACTT
    GAAATTAGTGGTGAAAATCAAATTAAAAGTCATATACTATACGAAGTTCTAATGATTTAT
    CGACTGCTAGACAGCAGATATGCTTAA
    60
    120
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    360
    420
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    540
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    720
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    840
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    960
    987

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SACOL_RS10185 [old locus tag: SACOL1947 ]
  • symbol: SACOL_RS10185
  • description: membrane protein
  • length: 328
  • theoretical pI: 9.62632
  • theoretical MW: 37435.5
  • GRAVY: 0.0890244

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
  • TheSEED:
  • PFAM:
    FUSC (CL0307) ArAE_1; Aromatic acid exporter family member 1 (PF06081; HMM-score: 100.7)
    FUSC; Fusaric acid resistance protein family (PF04632; HMM-score: 49.4)
    ALMT; Aluminium activated malate transporter (PF11744; HMM-score: 31.6)
    FUSC_2; Fusaric acid resistance protein-like (PF13515; HMM-score: 26)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 4
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.209
    • Ymax_pos: 39
    • Cmax: 0.247
    • Cmax_pos: 39
    • Smax: 0.311
    • Smax_pos: 36
    • Smean: 0.204
    • D: 0.207
  • predicted transmembrane helices (TMHMM): 4

Accession numbers[edit source | edit]

  • GI: 446922457 NCBI
  • RefSeq: WP_000999713 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MNDQWYKHLIGARTIKTGIAIFLTAVFCMALDLTPIYAILTAVVTIEPTAKASLIKGYRRLPATVIGAGFAVLFTYLFGDQSPFTYALSATFTILFCTKLKLQVGTNVAVLTSLAMIPGIHDAYIFNFLSRTLTAIIGLVTSGLINFMVFPPKYYGQVEEKLSKTDALMYKLFYNRCQELILSRLQSDKSEKAYKNIFNLNNQVETLISYQRDELSYHKKKECDWKLLNQLTKRAYTNRLFITHLSNIIYLPKNTRVNFSGDEKMALLKISSSIKDIFYDGSFKREDDSVETLRSTIKALEISGENQIKSHILYEVLMIYRLLDSRYA

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • SACOL_RS10185 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]