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NCBI: 02-MAR-2017

Summary[edit | edit source]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS12095 [old locus tag: SACOL2299 ]
  • pan locus tag?: SAUPAN005784000
  • symbol: SACOL_RS12095
  • pan gene symbol?:
  • synonym:
  • product: hypothetical protein

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: SACOL_RS12095 [old locus tag: SACOL2299 ]
  • symbol: SACOL_RS12095
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 2360192..2360425
  • length: 234
  • essential: unknown other strains

Accession numbers[edit | edit source]

  • Location: NC_002951 (2360192..2360425) NCBI
  • BioCyc: G1G4B-2531 BioCyc
  • MicrobesOnline: see SACOL2299

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    ATGTTAAAAACGTCAGCTGTAATTTCTAATACATTATTAGTCATAGGTTTAGTCTGTCTA
    TTTATGATGAAATTAGTGTTAGCTATTACTTTTTTTGCTGTTTCATTATCAATTAGTCTA
    GTTGTCTTTAATATGATGTTCAGAGATAGAACAACGATGAAAGTAATCGTTAACGCTTCT
    TTTTTAATCGTAATATTAGCGATTGTAGTGGCATATTTTTTATTGTCTAAGTAA
    60
    120
    180
    234

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SACOL_RS12095 [old locus tag: SACOL2299 ]
  • symbol: SACOL_RS12095
  • description: hypothetical protein
  • length: 77
  • theoretical pI: 10.8508
  • theoretical MW: 8548.69
  • GRAVY: 1.6974

Function[edit | edit source]

  • TIGRFAM:
  • TheSEED: see SACOL2299
  • PFAM:
    BPD_transp_1 (CL0404) FtsX; FtsX-like permease family (PF02687; HMM-score: 9.8)
    Chemosens_recp (CL0176) 7tm_6; 7tm Odorant receptor (PF02949; HMM-score: 7.9)

Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 3
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.007246
    • TAT(Tat/SPI): 0.002057
    • LIPO(Sec/SPII): 0.017757
  • predicted transmembrane helices (TMHMM): 2

Accession numbers[edit | edit source]

Protein sequence[edit | edit source]

  • MLKTSAVISNTLLVIGLVCLFMMKLVLAITFFAVSLSISLVVFNMMFRDRTTMKVIVNASFLIVILAIVVAYFLLSK

Experimental data[edit | edit source]

  • experimentally validated:
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]

Protein synthesis (provided by Aureolib)[edit | edit source]

Protein stability[edit | edit source]

  • half-life: no data available

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]