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04-0298108BA0217611819-9771193COLECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50N315NCTC8325NewmanRF122ST398T0131TCH60TW20USA300_FPR3757USA300_TCH1516VC40
NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS13430
  • pan locus tag?:
  • symbol: SACOL_RS13430
  • pan gene symbol?:
  • synonym:
  • product: FeoB-associated Cys-rich membrane protein

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SACOL_RS13430
  • symbol: SACOL_RS13430
  • product: FeoB-associated Cys-rich membrane protein
  • replicon: chromosome
  • strand: -
  • coordinates: 2624064..2624234
  • length: 171
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_002951 (2624064..2624234) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    GTGTCAGTCATTATTAACATTTTAATTTTTTTAGCAATTTTCGGATATGCCTTATATACA
    CTAGTAAAATTTTTCAAGCGTTCAAAACAAGGAAAATGTGGTACATGTGACATTAATCGT
    GATTGTTGTGGAACAGAACAGCACACAGCGAATCATTTTCCAGGGAAATAA
    60
    120
    171

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SACOL_RS13430
  • symbol: SACOL_RS13430
  • description: FeoB-associated Cys-rich membrane protein
  • length: 56
  • theoretical pI: 9.0099
  • theoretical MW: 6313.41
  • GRAVY: 0.15

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    Genetic information processingDNA metabolismDNA replication, recombination, and repairA/G-specific adenine glycosylase (TIGR01084; EC 3.2.2.-; HMM-score: 13.3)
  • TheSEED:
  • PFAM:
    no clan definedP12; Virus attachment protein p12 family (PF12669; HMM-score: 37.4)
    DUF2569; Protein of unknown function (DUF2569) (PF10754; HMM-score: 14.8)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helix: 1
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.148
    • Ymax_pos: 34
    • Cmax: 0.147
    • Cmax_pos: 27
    • Smax: 0.332
    • Smax_pos: 26
    • Smean: 0.152
    • D: 0.15
  • predicted transmembrane helices (TMHMM): 1

Accession numbers[edit source | edit]

  • GI: 446033263 NCBI
  • RefSeq: WP_000111118 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MSVIINILIFLAIFGYALYTLVKFFKRSKQGKCGTCDINRDCCGTEQHTANHFPGK

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • SACOL_RS13430 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]