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Summary[edit source | edit]

  • pan ID?: SAUPAN000853000
  • symbol?:
  • description?: hypothetical protein
  • strand?: +
  • coordinates?: 1122404..1122886
  • synteny block?: BlockID0004160
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_0094
    08BA02176:
    C248_0088
    11819-97:
    MS7_0087
    71193:
    ST398NM01_0112
    ECT-R 2:
    ECTR2_51
    ED133:
    SAOV_0046
    ED98:
    SAAV_0042
    HO 5096 0412:
    SAEMRSA15_00640
    JH1:
    SaurJH1_0085
    JH9:
    SaurJH9_0082
    JKD6008:
    SAA6008_00079
    JKD6159:
    SAA6159_00078
    LGA251:
    SARLGA251_00740
    M013:
    M013TW_0087
    MRSA252:
    SAR0104
    MSHR1132:
    SAMSHR1132_00700
    MSSA476:
    SAS0069
    Mu3:
    SAHV_0093
    Mu50:
    SAV0094
    MW2:
    MW0069
    RF122:
    SAB0037
    ST398:
    SAPIG0112
    T0131:
    SAT0131_00081
    TCH60:
    HMPREF0772_10396
    TW20:
    SATW20_01130
    USA300_TCH1516:
    USA300HOU_0107
    VC40:
    SAVC_00220

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MEKFNNWILNAISGSQTDKNETTEELKGAKFIILYAYSMLVLLALVISNIFIHILEPKLS
    N315            MEKFNNWILNAISGSQTDKNETTEELKGAKFIILYAYSMLVLLALVISNIFIHILEPKLS
    NCTC8325        MEKFNNWILNAISGSQTDKNETTEELKGAKFIILYAYSMLVLLALVISNIFIHILEPKLS
    Newman          MEKFNNWILNAISGSQTDKNETTEELKGAKFIILYAYSMLVLLALVISNIFIHILEPKLS
    USA300_FPR3757  MEKFNNWILNAISGSQTDKNETTEELKGAKFIILYAYSMLVLLALVISNIFIHILEPKLS
                    ************************************************************

    COL             ITTQIIIVLILIEALIGLRFLKAYDVKRGKDKENKKNSKDFVKLKSILVAILFTSLALTA
    N315            ITTQIIIVLILIEALIGLRFLKAYDVKRGKDKENKKNSKDFVKLKSILVAILFTSLALTA
    NCTC8325        ITTQIIIVLILIEALIGLRFLKAYDVKRGKDKENKKNSKDFVKLKSILVAILFTSLALTA
    Newman          ITTQIIIVLILIEALIGLRFLKAYDVKRGKDKENKKNSKDFVKLKSILVAILFTSLALTA
    USA300_FPR3757  ITTQIIIVLILIEALIGLRFLKAYDVKRGKDKENKKNSKDFVKLKSILVAILFTSLALTA
                    ************************************************************

    COL             GTVADIYGFTDLGNTRSDLIVWSIGGIIFGLVCYTMEDKR
    N315            GTVADIYGFTDLGNTRSDLIVWSIGGIIFGLVCYTMEDKK
    NCTC8325        GTVADIYGFTDLGNTRSDLIVWSIGGIIFGLVCYTMEDKR
    Newman          GTVADIYGFTDLGNTRSDLIVWSIGGIIFGLVCYTMEDKR
    USA300_FPR3757  GTVADIYGFTDLGNTRSDLIVWSIGGIIFGLVCYTMEDKR
                    ***************************************: