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⊟Summary[edit | edit source]
- pan ID?: SAUPAN000918000
- symbol?: sbnD
- synonym:
- description?: MFS transporter
- MFS transporter
- drug transporter
- drug transporter, putative
- membrane transporter protein
- putative drug transporter
- staphyloferrin B export MFS transporter
- major facilitator superfamily protein
- major facilitator transporter
- MFS family major facilitator transporter
- multidrug resistance efflux pump
- putative transport protein
- Siderophore staphylobactin biosynthesis protein SbnD
- transport protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1186623..1187879
- synteny block?: BlockID0004550
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0120 (sbnD)
08BA02176:
C248_0107
11819-97:
MS7_0111
6850:
RSAU_000073
71193:
ST398NM01_0130
ECT-R 2:
ECTR2_75
ED133:
SAOV_0066
ED98:
SAAV_0087
HO 5096 0412:
SAEMRSA15_00850
JH1:
SaurJH1_0110
JH9:
SaurJH9_0106
JKD6008:
SAA6008_00097 (sbnD)
JKD6159:
SAA6159_00102 (sbnD)
LGA251:
SARLGA251_00940 (sbnD)
M013:
M013TW_0109
MRSA252:
SAR0122
MSHR1132:
SAMSHR1132_00950
MSSA476:
SAS0093
Mu3:
SAHV_0118
Mu50:
SAV0119
MW2:
MW0092
RF122:
SAB0058
ST398:
SAPIG0131
T0131:
SAT0131_00105
TCH60:
HMPREF0772_10378
TW20:
SATW20_01310 (sbnD)
USA300_TCH1516:
USA300HOU_0130
VC40:
SAVC_00335
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MINQSIWRSNFRILWLSQFIAIAGLTVLVPLLPIYMASLQNLSVVEIQLWSGIAIAAPAV
N315 MINQSIWRSNFRILWLSQFIAIAGLTVLVPLLPIYMASLQNLSVVEIQLWSGIAIAAPAV
NCTC8325 MINQSIWRSNFRILWLSQFIAIAGLTVLVPLLPIYMASLQNLSVVEIQLWSGIAIAAPAV
Newman MINQSIWRSNFRILWLSQFIAIAGLTVLVPLLPIYMASLQNLSVVEIQLWSGIAIAAPAV
USA300_FPR3757 MINQSIWRSNFRILWLSQFIAIAGLTVLVPLLPIYMASLQNLSVVEIQLWSGIAIAAPAV
************************************************************
COL TTMIASPIWGKLGDKISRKWMVLRALLGLAVCLFLMALCTTPLQFVLVRLLQGLFGGVVD
N315 TTMIASPIWGKLGDKISRKWMVLRALLGLAVCLFLMALCTTPLQFVLVRLLQGLFGGVVD
NCTC8325 TTMIASPIWGKLGDKISRKWMVLRALLGLAVCLFLMALCTTPLQFVLVRLLQGLFGGVVD
Newman TTMIASPIWGKLGDKISRKWMVLRALLGLAVCLFLMALCTTPLQFVLVRLLQGLFGGVVD
USA300_FPR3757 TTMIASPIWGKLGDKISRKWMVLRALLGLAVCLFLMALCTTPLQFVLVRLLQGLFGGVVD
************************************************************
COL ASSAFASAEAPAEDRGKVLGRLQSSVSAGSLVGPLIGGVTASILGFSALLMSIAVITFIV
N315 ASSAFASAEAPAEDRGKVLGRLQSSVSAGSLVGPLIGGVTASILGFSALLMSIAVITFIV
NCTC8325 ASSAFASAEAPAEDRGKVLGRLQSSVSAGSLVGPLIGGVTASILGFSALLMSIAVITFIV
Newman ASSAFASAEAPAEDRGKVLGRLQSSVSAGSLVGPLIGGVTASILGFSALLMSIAVITFIV
USA300_FPR3757 ASSAFASAEAPAEDRGKVLGRLQSSVSAGSLVGPLIGGVTASILGFSALLMSIAVITFIV
************************************************************
COL CIFGALKLIETTHMPKSQTPNINKGIRRSFQCLLCTQQTCRFIIVGVLANFAMYGMLTAL
N315 CIFGALKLIETTHMPKSQTPNINKGIRRSFQCLLCTQQTCRFIIVGVLANFAMYGMLTAL
NCTC8325 CIFGALKLIETTHMPKSQTPNINKGIRRSFQCLLCTQQTCRFIIVGVLANFAMYGMLTAL
Newman CIFGALKLIETTHMPKSQTPNINKGIRRSFQCLLCTQQTCRFIIVGVLANFAMYGMLTAL
USA300_FPR3757 CIFGALKLIETTHMPKSQTPNINKGIRRSFQCLLCTQQTCRFIIVGVLANFAMYGMLTAL
************************************************************
COL SPLASSVNHTAIDDRSVIGFLQSAFWTASILSAPLWGRFNDKSYVKSVYIFATIACGCSA
N315 SPLASSVNHTAIDDRSVIGFLQSAFWTASILSAPLWGRFNDKSYVKSVYIFATIACGCSA
NCTC8325 SPLASSVNHTAIDDRSVIGFLQSAFWTASILSAPLWGRFNDKSYVKSVYIFATIACGCSA
Newman SPLASSVNHTAIDDRSVIGFLQSAFWTASILSAPLWGRFNDKSYVKSVYIFATIACGCSA
USA300_FPR3757 SPLASSVNHTAIDDRSVIGFLQSAFWTASILSAPLWGRFNDKSYVKSVYIFATIACGCSA
************************************************************
COL ILQGLATNIEFLMAARILQGLTYSALIQSVMFVVVNACHQQLKGTFVGTTNSMLVVGQII
N315 ILQGLATNIEFLMAARILQGLTYSALIQSVMFVVVNACHQQLKGTFVGTTNSMLVVGQII
NCTC8325 ILQGLATNIEFLMAARILQGLTYSALIQSVMFVVVNACHQQLKGTFVGTTNSMLVVGQII
Newman ILQGLATNIEFLMAARILQGLTYSALIQSVMFVVVNACHQQLKGTFVGTTNSMLVVGQII
USA300_FPR3757 ILQGLATNIEFLMAARILQGLTYSALIQSVMFVVVNACHQQLKGTFVGTTNSMLVVGQII
************************************************************
COL GSLSGAAITSYTTPATTFIVMGVVFAVSSLFLICSTITNQINDHTLMKLWELKQKSAK
N315 GSLSGAAITSYTTPATTFIVMGVVFAVSSLFLICSTITNQINDHTLMKLWELKQKSAK
NCTC8325 GSLSGAAITSYTTPATTFIVMGVVFAVSSLFLICSTITNQINDHTLMKLWELKQKSAK
Newman GSLSGAAITSYTTPATTFIVMGVVFAVSSLFLICSTITNQINDHTLMKLWELKQKSAK
USA300_FPR3757 GSLSGAAITSYTTPATTFIVMGVVFAVSSLFLICSTITNQINDHTLMKLWELKQKSAK
**********************************************************