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Summary[edit source | edit]

  • pan ID?: SAUPAN002470000
  • symbol?: adh1
  • description?: alcohol dehydrogenase

      descriptions from strain specific annotations:

    • alcohol dehydrogenase
    • zinc-dependent alcohol dehydrogenase
    • alcohol dehydrogenase, propanol-preferring
    • alcohol dehydrogenase 1 (Alcohol dehydrogenase I) (ADHI)
    • ethanol-active dehydrogenase/acetaldehyde-active reductase
    • zinc-binding alcohol dehydrogenase
  • strand?: +
  • coordinates?: 2985635..2986645
  • synteny block?: BlockID0017060
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL0660 (adhP)
    N315:
    SA0562 (adh1)
    NCTC8325:
    Newman:
    NWMN_0577 (adh1)
    USA300_FPR3757:
    04-02981:
    SA2981_0582 (adh1)
    08BA02176:
    C248_0689 (adhA)
    11819-97:
    MS7_0658 (adh)
    71193:
    ST398NM01_0686
    ECT-R 2:
    ECTR2_558
    ED133:
    SAOV_0640
    ED98:
    SAAV_0569 (adhP)
    HO 5096 0412:
    SAEMRSA15_05330 (adhA)
    JH1:
    SaurJH1_0643 (adhA)
    JH9:
    SaurJH9_0628 (adhA)
    JKD6008:
    SAA6008_00623
    JKD6159:
    SAA6159_00562
    LGA251:
    SARLGA251_05410 (adhA)
    M013:
    M013TW_0594
    MRSA252:
    SAR0613 (adhA)
    MSHR1132:
    SAMSHR1132_05480
    MSSA476:
    SAS0573 (adhA)
    Mu3:
    SAHV_0603 (adh1)
    Mu50:
    SAV0605 (adh1)
    MW2:
    MW0568 (adh1)
    RF122:
    SAB0557 (adhA)
    ST398:
    SAPIG0686
    T0131:
    SAT0131_00672 (pepS)
    TCH60:
    HMPREF0772_12581 (adhP)
    TW20:
    SATW20_06820 (adhA)
    USA300_TCH1516:
    USA300HOU_0610 (adh)
    VC40:
    SAVC_02665

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MRAAVVTKDHKVSIEDKKLRALKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTLGHEG
    N315            MRAAVVTKDHKVSIEDKKLRALKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTLGHEG
    NCTC8325        MRAAVVTKDHKVSIEDKKLRALKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTLGHEG
    Newman          MRAAVVTKDHKVSIEDKKLRALKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTLGHEG
    USA300_FPR3757  MRAAVVTKDHKVSIEDKKLRALKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTLGHEG
                    ************************************************************

    COL             IGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQ
    N315            IGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQ
    NCTC8325        IGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQ
    Newman          IGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQ
    USA300_FPR3757  IGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQ
                    ************************************************************

    COL             VIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQY
    N315            VIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQY
    NCTC8325        VIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQY
    Newman          VIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQY
    USA300_FPR3757  VIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQY
                    ************************************************************

    COL             AKNVMGAKIVAFDINDDKLAFAKELGADAIINSKDVDPVAEVMKLTDNKGLDATVVTSVA
    N315            AKNVMGAKIVAFDINDDKLAFAKELGADAIINSKDVDPVAEVMKLTDNKGLDATVVTSVA
    NCTC8325        AKNVMGAKIVAFDINDDKLAFAKELGADAIINSKDVDPVAEVMKLTDNKGLDATVVTSVA
    Newman          AKNVMGAKIVAFDINDDKLAFAKELGADAIINSKDVDPVAEVMKLTDNKGLDATVVTSVA
    USA300_FPR3757  AKNVMGAKIVAFDINDDKLAFAKELGADAIINSKDVDPVAEVMKLTDNKGLDATVVTSVA
                    ************************************************************

    COL             KTPFNQAVDVVKAGARVVAVGLPVDKMNLDIPRLVLDGIEVVGSLVGTRQDLREAFEFAA
    N315            KTPFNQAVDVVKAGARVVAVGLPVDKMNLDIPRLVLDGIEVVGSLVGTRQDLREAFEFAA
    NCTC8325        KTPFNQAVDVVKAGARVVAVGLPVDKMNLDIPRLVLDGIEVVGSLVGTRQDLREAFEFAA
    Newman          KTPFNQAVDVVKAGARVVAVGLPVDKMNLDIPRLVLDGIEVVGSLVGTRQDLREAFEFAA
    USA300_FPR3757  KTPFNQAVDVVKAGARVVAVGLPVDKMNLDIPRLVLDGIEVVGSLVGTRQDLREAFEFAA
                    ************************************************************

    COL             ENKVTPKVQLRKLEEINDIFEEMENGTITGRMVIKF
    N315            ENKVTPKVQLRKLEEINDIFEEMEKGTITGRMVIKF
    NCTC8325        ENKVTPKVQLRKLEEINDIFEEMENGTITGRMVIKF
    Newman          ENKVTPKVQLRKLEEINDIFEEMENGTITGRMVIKF
    USA300_FPR3757  ENKVTPKVQLRKLEEINDIFEEMENGTITGRMVIKF
                    ************************:***********