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Summary[edit source | edit]

  • pan ID?: SAUPAN002535000
  • symbol?:
  • description?: hypothetical protein
  • strand?: +
  • coordinates?: 3046939..3047367
  • synteny block?: BlockID0017710
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_0632
    08BA02176:
    C248_0739
    11819-97:
    MS7_0706
    71193:
    ST398NM01_0734
    ECT-R 2:
    ECTR2_607
    ED133:
    SAOV_0690
    ED98:
    SAAV_0618
    HO 5096 0412:
    SAEMRSA15_05820
    JH1:
    SaurJH1_0694
    JH9:
    SaurJH9_0679
    JKD6008:
    SAA6008_00672
    JKD6159:
    SAA6159_00610
    LGA251:
    SARLGA251_05890
    M013:
    M013TW_0643
    MRSA252:
    SAR0666
    MSHR1132:
    SAMSHR1132_06020
    MSSA476:
    SAS0621
    Mu3:
    SAHV_0653
    Mu50:
    SAV0656
    MW2:
    MW0618
    RF122:
    SAB0605
    ST398:
    SAPIG0734
    T0131:
    SAT0131_00726
    TCH60:
    HMPREF0772_12532
    TW20:
    SATW20_07310
    USA300_TCH1516:
    USA300HOU_0677
    VC40:
    SAVC_02910

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MTRSALKPFKNKRVMVTGRIQRVLFKNYLDRHSTFKPNVRILLKDVFVSGVSIDHLWLYE
    N315            MTRSALKPFKNKRVMVTGRIQRVLFKNYLDRHSTFKPNVRILLKDVFVSGVSIDHLWLYE
    NCTC8325        MTRSALKPFKNKRVMVTGRIQRVLFKNYLDRHSTFKPNVRILLKDVFVSGVSIDHLWLYE
    Newman          MTRSALKPFKNKRVMVTGRIQRVLFKNYLDRHSTFKPNVRILLKDVFVSGVSIDHLWLYE
    USA300_FPR3757  MTRSALKPFKNKRVMVTGRIQRVLFKNYLDRHSTFKPNVRILLKDVFVSGVSIDHLWLYE
                    ************************************************************

    COL             TNKYYALAMELIHQRVKFSANVVPYYKINRNNNLFVQDYGIKRKGRLITEEAYNQNNQYQ
    N315            TNKYYALAMELIHQRVKFSANVVPYYKINRNNNLFVQDYGIKRKGRLITEEAYNQNNQYQ
    NCTC8325        TNKYYALAMELIHQRVKFSANVVPYYKINRNNNLFVQDYGIKRKGRLITEEAYNQNNQYQ
    Newman          TNKYYALAMELIHQRVKFSANVVPYYKINRNNNLFVQDYGIKRKGRLITEEAYNQNNQYQ
    USA300_FPR3757  TNKYYALAMELIHQRVKFSANVVPYYKINRNNNLFVQDYGIKRKGRLITEEAYNQNNQYQ
                    ************************************************************

    COL             DKIYEKLPDIDFRLEDFYSKEN
    N315            DKIYEKLPDIDFRLEDFYSKEN
    NCTC8325        DKIYEKLPDIDFRLEDFYSKEN
    Newman          DKIYEKLPDIDFRLEDFYSKEN
    USA300_FPR3757  DKIYEKLPDIDFRLEDFYSKEN
                    **********************