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Summary[edit source | edit]

  • pan ID?: SAUPAN002553000
  • symbol?:
  • description?: hypothetical protein
  • strand?: +
  • coordinates?: 3066583..3067239
  • synteny block?: BlockID0017890
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_0648
    08BA02176:
    C248_0756
    11819-97:
    MS7_0722
    71193:
    ST398NM01_0749
    ECT-R 2:
    ECTR2_623
    ED133:
    SAOV_0706
    ED98:
    SAAV_0634
    HO 5096 0412:
    SAEMRSA15_05970
    JH1:
    SaurJH1_0711
    JH9:
    SaurJH9_0695
    JKD6008:
    SAA6008_00688
    JKD6159:
    SAA6159_00625
    LGA251:
    SARLGA251_06040
    M013:
    M013TW_0658
    MRSA252:
    SAR0682
    MSHR1132:
    SAMSHR1132_06170
    MSSA476:
    SAS0636
    Mu3:
    SAHV_0668
    Mu50:
    SAV0671
    MW2:
    MW0633
    RF122:
    SAB0620
    ST398:
    SAPIG0749
    T0131:
    SAT0131_00742
    TCH60:
    HMPREF0772_12517
    TW20:
    SATW20_07460
    USA300_TCH1516:
    USA300HOU_0693
    VC40:
    SAVC_02985

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MKVKYIDKRHWRRLIDREYTEVKVNNNRFKGIIGLVTMKKVRDPLEVTVVGQNIIVADDN
    N315            MKVKYIDKRHWRRLIDREYTEVKVNNNRFKGIIGLVTMKKVRDPLEVTVVGQNIIVADDN
    NCTC8325        MKVKYIDKRHWRRLIDREYTEVKVNNNRFKGIIGLVTMKKVRDPLEVTVVGQNIIVADDN
    Newman          MKVKYIDKRHWRRLIDREYTEVKVNNNRFKGIIGLVTMKKVRDPLEVTVVGQNIIVADDN
    USA300_FPR3757  MKVKYIDKRHWRRLIDREYTEVKVNNNRFKGIIGLVTMKKVRDPLEVTVVGQNIIVADDN
                    ************************************************************

    COL             YKWLQILPEKKRYSITVMFDNKGNPLEYYFDINIKNITQKGNARTVDLCLDVLALPSGEY
    N315            YKWLQILPEKKRYSITVMFDNKGNPLEYYFDINIKNITQKGNARTVDLCLDVLALPSGEY
    NCTC8325        YKWLQILPEKKRYSITVMFDNKGNPLEYYFDINIKNITQKGNARTVDLCLDVLALPSGEY
    Newman          YKWLQILPEKKRYSITVMFDNKGNPLEYYFDINIKNITQKGNACTVDLCLDVLALPSGEY
    USA300_FPR3757  YKWLQILPEKKRYSITVMFDNKGNPLEYYFDINIKNITQKGNARTVDLCLDVLALPSGEY
                    ******************************************* ****************

    COL             ELVDEDDLMFALESEQITKKQFHEAYMIAHQIMAELENDFKGFQKKIMYCFNKINAKAQK
    N315            ELVDEDDLMFALESEQITKKQFHEAYMIAHQIMAELENDFKGFQKKIMYCFNKINAKAQK
    NCTC8325        ELVDEDDLMFALESEQITKKQFHEAYMIAHQIMAELENDFKGFQKKIMYCFNKINAKAQK
    Newman          ELVDEDDLMFALESEQITKKQFHEAYMIAHQIMAELENDFKGFQKKIMYCFNKINAKAQK
    USA300_FPR3757  ELVDEDDLMFALESEQITKKQFHEAYMIAHQIMAELENDFKGFQKKIMYCFNKINAKAQK
                    ************************************************************

    COL             NHQKPQNKTNIEKSKQIKPKQYNQTKNHQQQKKN
    N315            NHQKPQNKTNIEKSKQIKPKQYNQTKNHQQQKKN
    NCTC8325        NHQKPQNKTNIEKSKQIKPKQYNQTKNHQQQKKN
    Newman          NHQKPQNKTNIEKSKQIKPKQYNQTKNHQQQKKN
    USA300_FPR3757  NHQKPQNKTNIEKSKQIKPKQYNQTKNHQQQKKN
                    **********************************