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Summary[edit source | edit]

  • pan ID?: SAUPAN002805000
  • symbol?:
  • description?: hypothetical protein
  • strand?: -
  • coordinates?: 3271537..3272106
  • synteny block?: BlockID0019960
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_0774
    08BA02176:
    C248_0889
    11819-97:
    MS7_0847
    71193:
    ST398NM01_0875
    ECT-R 2:
    ECTR2_747
    ED133:
    SAOV_0836c
    ED98:
    SAAV_0765
    HO 5096 0412:
    SAEMRSA15_07220
    JH1:
    SaurJH1_0836
    JH9:
    SaurJH9_0820
    JKD6008:
    SAA6008_00811
    JKD6159:
    SAA6159_00751
    LGA251:
    SARLGA251_07270
    M013:
    M013TW_0786
    MRSA252:
    SAR0851
    MSHR1132:
    SAMSHR1132_07440
    MSSA476:
    SAS0760
    Mu3:
    SAHV_0815
    Mu50:
    SAV0819
    MW2:
    MW0773
    RF122:
    SAB0752c
    ST398:
    SAPIG0875
    T0131:
    SAT0131_00896
    TCH60:
    HMPREF0772_12383
    TW20:
    SATW20_08700
    USA300_TCH1516:
    USA300HOU_0827
    VC40:
    SAVC_03625

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MNYIKRTIILLILFVVVSPINSPKTIADNKYSEIQDDKFQLQPGDIIVTKGPVMWGFFGH
    N315            MNYIKRTIILLILFVVVSPINSPKTIADNKYSEIQDDKFQLQPGDIIVTKGPVMWGFFGH
    NCTC8325        MNYIKRTIILLILFVVVSPINSPKTIADNKYSEIQDDKFQLQPGDIIVTKGPVMWGFFGH
    Newman          MNYIKRTIILLILFVVVSPINSPKTIADNKYSEIQDDKFQLQPGDIIVTKGPVMWGFFGH
    USA300_FPR3757  MNYIKRTIILLILFVVVSPINSPKTIADNKYSEIQDDKFQLQPGDIIVTKGPVMWGFFGH
                    ************************************************************

    COL             CSIAIDDKTILQIEGPGDKPTTQSFESFKYNYASGKNDWMKVYRCSYPGAGKKAAEWVKK
    N315            CSIAIDDKTILQIEGPGDKPTTQSFESFKYNYASGKNDWMKVYRCSYPGAGKKAAEWVKK
    NCTC8325        CSIAIDDKTILQIEGPGDKPTTQSFESFKYNYASGKNDWMKVYRCSYPGAGKKAAEWVKK
    Newman          CSIAIDDKTILQIEGPGDKPTTQSFESFKYNYASGKNDWMKVYRCSYPGAGKKAAEWVKK
    USA300_FPR3757  CSIAIDDKTILQIEGPGDKPTTQSFESFKYNYASGKNDWMKVYRCSYPGAGKKAAEWVKK
                    ************************************************************

    COL             NYENTNHRYLVTLNLNSKKFTYCTKIIYQAYKFGVSEKSVKSYGLHIISPYAIKDNFIDP
    N315            NYENTNHRYLVTLNLNSKKFTYCTKIIYQAYKFGVSEKSVKSYGLHIISPYAIKDNFIDP
    NCTC8325        NYENTNHRYLVTLNLNSKKFTYCTKIIYQAYKFGVSEKSVKSYGLHIISPYAIKDNFIDP
    Newman          NYENTNHRYLVTLNLNSKKFTYCTKIIYQAYKFGVSEKSVKSYGLHIISPYAIKDNFIDP
    USA300_FPR3757  NYENTNHRYLVTLNLNSKKFTYCTKIIYQAYKFGVSEKSVKSYGLHIISPYAIKDNFIDP
                    ************************************************************

    COL             YKLRLVKAY
    N315            YKLRLVKAY
    NCTC8325        YKLRLVKAY
    Newman          YKLRLVKAY
    USA300_FPR3757  YKLRLVKAY
                    *********