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Summary[edit source | edit]

  • pan ID?: SAUPAN003073000
  • symbol?: spsA
  • description?: type-I signal peptidase

      descriptions from strain specific annotations:

    • type-I signal peptidase
    • signal peptidase Ia
    • Signal peptidase I
    • S26 family signal peptidase I
    • Sec family Type I general secretory pathway S26 family signal peptidase I, LepB
    • putative signal peptidase Ia
    • signal peptidase IA, inactive
    • type-I signal peptidase A component
    • type I general secretory pathway signal peptidase I
    • Inactive signal peptidase IA
  • strand?: +
  • coordinates?: 3459662..3460186
  • synteny block?: BlockID0021810
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL0968 (spsA)
    N315:
    SA0825 (spsA)
    NCTC8325:
    Newman:
    NWMN_0835 (spsA)
    USA300_FPR3757:
    04-02981:
    SA2981_0919 (spsA)
    08BA02176:
    C248_0965 (spsA)
    11819-97:
    MS7_0919
    71193:
    ST398NM01_0947
    ECT-R 2:
    ECTR2_820 (lepB)
    ED133:
    SAOV_0911
    ED98:
    SAAV_0925 (lepB)
    HO 5096 0412:
    SAEMRSA15_07940 (spsA)
    JH1:
    SaurJH1_0983
    JH9:
    SaurJH9_0964
    JKD6008:
    SAA6008_00917 (lepB)
    JKD6159:
    SAA6159_00823 (lepB)
    LGA251:
    SARLGA251_08820 (spsA)
    M013:
    M013TW_0883
    MRSA252:
    SAR0926 (spsA)
    MSHR1132:
    SAMSHR1132_08160
    MSSA476:
    SAS0834
    Mu3:
    SAHV_0959 (spsA)
    Mu50:
    SAV0964 (spsA)
    MW2:
    MW0846 (spsA)
    RF122:
    SAB0833 (spsA)
    ST398:
    SAPIG0947 (lepB)
    T0131:
    SAT0131_00997
    TCH60:
    HMPREF0772_12282 (spsA)
    TW20:
    SATW20_09640 (spsA)
    USA300_TCH1516:
    USA300HOU_0923 (spsA)
    VC40:
    SAVC_03995

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MKKVVKYLISLILAIIIVLFVQTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNN
    N315            MKKVVKYLISLILAIIIVLFVQTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNN
    NCTC8325        MKKVVKYLISLILAIIIVLFVQTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNN
    Newman          MKKVVKYLISLILAIIIVLFVQTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNN
    USA300_FPR3757  MKKVVKYLISLILAIIIVLFVQTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNN
                    ************************************************************

    COL             GDIITYRRGNEIYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKEL
    N315            GDIITYRRGNEIYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKEL
    NCTC8325        GDIITYRRGNEIYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKEL
    Newman          GDIITYRRGNEIYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKEL
    USA300_FPR3757  GDIITYRRGNEIYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKEL
                    ************************************************************

    COL             DGDIIPPNNFVVLNDQDNNKHDSRQFGLIDKKDIIGNVSLRYYPFSKWTVQFKS
    N315            DGDIIPPNNFVVLNDHDNNQHDSRQFGLIDKKDIIGNISLRYYPFSKWTIQFKS
    NCTC8325        DGDIIPPNNFVVLNDQDNNKHDSRQFGLIDKKDIIGNVSLRYYPFSKWTVQFKS
    Newman          DGDIIPPNNFVVLNDQDNNKHDSRQFGLIDKKDIIGNVSLRYYPFSKWTVQFKS
    USA300_FPR3757  DGDIIPPNNFVVLNDQDNNKHDSRQFGLIDKKDIIGNVSLRYYPFSKWTVQFKS
                    ***************:***:*****************:***********:****