From AureoWiki
Jump to: navigation, search

Summary[edit source | edit]

  • pan ID?: SAUPAN003283000
  • symbol?: purF
  • description?: amidophosphoribosyltransferase

      descriptions from strain specific annotations:

    • amidophosphoribosyltransferase
    • putative amidophosphoribosyltransferase precursor
    • phosphoribosylpyrophosphate amidotransferase
  • strand?: +
  • coordinates?: 3657848..3659353
  • synteny block?: BlockID0023670
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1079 (purF)
    N315:
    SA0922 (purF)
    NCTC8325:
    Newman:
    NWMN_0938 (purF)
    USA300_FPR3757:
    04-02981:
    SA2981_1026 (purF)
    08BA02176:
    C248_1095 (purF)
    11819-97:
    MS7_1028 (purF)
    71193:
    ST398NM01_1068
    ECT-R 2:
    ECTR2_926 (purF)
    ED133:
    SAOV_1015
    ED98:
    SAAV_1035 (purF)
    HO 5096 0412:
    SAEMRSA15_09010 (purF)
    JH1:
    SaurJH1_1152
    JH9:
    SaurJH9_1130
    JKD6008:
    SAA6008_01026 (purF)
    JKD6159:
    SAA6159_00926 (purF)
    LGA251:
    SARLGA251_09840 (purF)
    M013:
    M013TW_1002
    MRSA252:
    SAR1044 (purF)
    MSHR1132:
    SAMSHR1132_09180
    MSSA476:
    SAS1006
    Mu3:
    SAHV_1062 (purF)
    Mu50:
    SAV1070 (purF)
    MW2:
    MW0953 (purF)
    RF122:
    SAB0937 (purF)
    ST398:
    SAPIG1068 (purF)
    T0131:
    SAT0131_01106
    TCH60:
    HMPREF0772_12163 (purF)
    TW20:
    SATW20_10660 (purF)
    USA300_TCH1516:
    USA300HOU_1015 (purF)
    VC40:
    SAVC_04515

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MFNYSGLNEECGVFGIWNHPEAAQLTYMGLHSLQHRGQEGAGIVVSDQNELKGERGLGLL
    N315            MFNYSGLNEECGVFGIWNHPEAAQLTYMGLHSLQHRGQEGAGIVVSDQNELKGERGLGLL
    NCTC8325        MFNYSGLNEECGVFGIWNHPEAAQLTYMGLHSLQHRGQEGAGIVVSDQNELKGERGLGLL
    Newman          MFNYSGLNEECGVFGIWNHPEAAQLTYMGLHSLQHRGQEGAGIVVSDQNELKGERGLGLL
    USA300_FPR3757  MFNYSGLNEECGVFGIWNHPEAAQLTYMGLHSLQHRGQEGAGIVVSDQNELKGERGLGLL
                    ************************************************************

    COL             TEAIKDDQMERLKGYQHAIGHVRYATSGNKGIENIQPFLYHFYDMSVGICHNGNLINAKS
    N315            TEAINDDQMERLKGYQHAIGHVRYATSGNKGIENIQPFLYHFYDMSVGICHNGNLINAKS
    NCTC8325        TEAIKDDQMERLKGYQHAIGHVRYATSGNKGIENIQPFLYHFYDMSVGICHNGNLINAKS
    Newman          TEAIKDDQMERLKGYQHAIGHVRYATSGNKGIENIQPFLYHFYDMSVGICHNGNLINAKS
    USA300_FPR3757  TEAIKDDQMERLKGYQHAIGHVRYATSGNKGIENIQPFLYHFYDMSVGICHNGNLINAKS
                    ****:*******************************************************

    COL             LRQNLEKQGAIFHSSSDTEVIMHLIRRSKAPTFEEALKESLRKVKGGFTFAILTKDALYG
    N315            LRQNLEKQGAIFHSSSDTEVIMHLIRRSKAPTFEEALKESLRKVKGGFTFAILTKDALYG
    NCTC8325        LRQNLEKQGAIFHSSSDTEVIMHLIRRSKAPTFEEALKESLRKVKGGFTFAILTKDALYG
    Newman          LRQNLEKQGAIFHSSSDTEVIMHLIRRSKAPTFEEALKESLRKVKGGFTFAILTKDALYG
    USA300_FPR3757  LRQNLEKQGAIFHSSSDTEVIMHLIRRSKAPTFEEALKESLRKVKGGFTFAILTKDALYG
                    ************************************************************

    COL             AVDPNAIRPLVVGKMKDGTYILASETCAIDVLGAEFVQDIHAGEYVVINDKGITVKSYTH
    N315            AVDPNAIRPLVVGKMKDGTYILASETCAIDVLGAEFVQDIHAGEYVVINDKGITVKSYTH
    NCTC8325        AVDPNAIRPLVVGKMKDGTYILASETCAIDVLGAEFVQDIHAGEYVVINDKGITVKSYTH
    Newman          AVDPNAIRPLVVGKMKDGTYILASETCAIDVLGAEFVQDIHAGEYVVINDKGITVKSYTH
    USA300_FPR3757  AVDPNAIRPLVVGKMKDGTYILASETCAIDVLGAEFVQDIHAGEYVVINDKGITVKSYTH
                    ************************************************************

    COL             HTTTAISAMEYIYFARPDSTIAGKNVHAVRKASGKKLAQESPVNADMVIGVPNSSLSAAS
    N315            HTTTAISAMEYIYFARPDSTIAGKNVHAVRKASGKKLAQESPVNADMVIGVPNSSLSAAS
    NCTC8325        HTTTAISAMEYIYFARPDSTIAGKNVHAVRKASGKKLAQESPVNADMVIGVPNSSLSAAS
    Newman          HTTTAISAMEYIYFARPDSTIAGKNVHAVRKASGKKLAQESPVNADMVIGVPNSSLSAAS
    USA300_FPR3757  HTTTAISAMEYIYFARPDSTIAGKNVHAVRKASGKKLAQESPVNADMVIGVPNSSLSAAS
                    ************************************************************

    COL             GYAEEIGLPYEMGLVKNQYVARTFIQPTQELREQGVRVKLSAVKDIVDGKNIILVDDSIV
    N315            GYAEEIGLPYEMGLVKNQYVARTFIQPTQELREQGVRVKLSAVKDIVDGKNIILVDDSIV
    NCTC8325        GYAEEIGLPYEMGLVKNQYVARTFIQPTQELREQGVRVKLSAVKDIVDGKNIILVDDSIV
    Newman          GYAEEIGLPYEMGLVKNQYVARTFIQPTQELREQGVRVKLSAVKDIVDGKNIILVDDSIV
    USA300_FPR3757  GYAEEIGLPYEMGLVKNQYVARTFIQPTQELREQGVRVKLSAVKDIVDGKNIILVDDSIV
                    ************************************************************

    COL             RGTTIRRIVKMLKDSGANKVHVRIASPEFMFPSFYGIDVSTTAELISASKSPEEIKDYIG
    N315            RGTTIRRIVKMLKDSGANKVHVRIASPEFMFPSFYGIDVSTTAELISASKSPEEIKDYIG
    NCTC8325        RGTTIRRIVKMLKDSGANKVHVRIASPEFMFPSFYGIDVSTTAELISASKSPEEIKDYIG
    Newman          RGTTIRRIVKMLKDSGANKVHVRIASPEFMFPSFYGIDVSTTAELISASKSPEEIKDYIG
    USA300_FPR3757  RGTTIRRIVKMLKDSGANKVHVRIASPEFMFPSFYGIDVSTTAELISASKSPEEIKDYIG
                    ************************************************************

    COL             ADSLAYLSVDGLIESIGLDYDAPYSGLCVESFTGDYPAGLYDYEANYKAHLSHRQKQYIS
    N315            ADSLAYLSVDGLIESIGLDYDAPYSGLCVESFTGDYPAGLYDYEANYKAHLSHRQKQYIS
    NCTC8325        ADSLAYLSVDGLIESIGLDYDAPYSGLCVESFTGDYPAGLYDYEANYKAHLSHRQKQYIS
    Newman          ADSLAYLSVDGLIESIGLDYDAPYSGLCVESFTGDYPAGLYDYEANYKAHLSHRQKQYIS
    USA300_FPR3757  ADSLAYLSVDGLIESIGLDYDAPYSGLCVESFTGDYPAGLYDYEANYKAHLSHRQKQYIS
                    ************************************************************

    COL             KNKHFFDSEGNLNV
    N315            KNKHFFDSEGNLNV
    NCTC8325        KNKHFFDSEGNLNV
    Newman          KNKHFFDSEGNLNV
    USA300_FPR3757  KNKHFFDSEGNLNV
                    **************