Due to technical reasons this service will not be available for 7 days from 27 Nov to 04 Dec 2017
From AureoWiki
Jump to: navigation, search

Summary[edit source | edit]

  • pan ID?: SAUPAN003285000
  • symbol?: purN
  • description?: phosphoribosylglycinamide formyltransferase

      descriptions from strain specific annotations:

    • phosphoribosylglycinamide formyltransferase
    • putative phosphoribosylglycinamide formyltransferase
    • phosphoribosylformylglycinamidine formyltransferase
  • strand?: +
  • coordinates?: 3660377..3660943
  • synteny block?: BlockID0023690
  • occurrence?: in 97% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1081 (purN)
    N315:
    SA0924 (purN)
    NCTC8325:
    Newman:
    NWMN_0940 (purN)
    USA300_FPR3757:
    04-02981:
    SA2981_1028 (purN)
    08BA02176:
    C248_1097 (purN)
    11819-97:
    MS7_1030 (purN)
    71193:
    ST398NM01_1070
    ECT-R 2:
    ECTR2_928 (purN)
    ED133:
    SAOV_1017
    ED98:
    SAAV_1037 (purN)
    HO 5096 0412:
    SAEMRSA15_09030 (purN)
    JH1:
    SaurJH1_1154
    JH9:
    SaurJH9_1132
    JKD6008:
    SAA6008_01028 (purN)
    JKD6159:
    SAA6159_00928 (purN)
    LGA251:
    SARLGA251_09860 (purN)
    M013:
    M013TW_1004
    MRSA252:
    SAR1046 (purN)
    MSHR1132:
    SAMSHR1132_09200
    MSSA476:
    SAS1008
    Mu3:
    SAHV_1064 (purN)
    Mu50:
    SAV1072 (purN)
    MW2:
    MW0955 (purN)
    RF122:
    SAB0939 (purN)
    ST398:
    SAPIG1070 (purN)
    T0131:
    SAT0131_01108
    TCH60:
    HMPREF0772_12161 (purN)
    TW20:
    SATW20_10680 (purN)
    USA300_TCH1516:
    VC40:
    SAVC_04525

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MVKIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQNAFCIDRAKKHDIPVYINEP
    N315            MVKIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQNAFCIDRAKKHDIPVYINEP
    NCTC8325        MVKIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQNAFCIDRAKKHDIPVYINEP
    Newman          MVKIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQNAFCIDRAKKHDIPVYINEP
    USA300_FPR3757  MVKIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQNAFCIDRAKKHDIPVYINEP
                    ************************************************************

    COL             KQFDSKAAYEQHLVTLLNEDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKGI
    N315            KQFDSKAAYEQHLVTLLNKDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKGI
    NCTC8325        KQFDSKAAYEQHLVTLLNEDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKGI
    Newman          KQFDSKAAYEQHLVTLLNEDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKGI
    USA300_FPR3757  KQFDSKAAYEQHLVTLLNEDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKGI
                    ******************:*****************************************

    COL             DAIGQAYHSGDTITGSTVHYVDSGMDTGEIIEQRKCDIRPDDSKEQLEEKVKKLEYELYP
    N315            DAIGQAYHSGDTITGSTVHYVDCGMDTGEIIEQRQCDIRPDDSKEQLEEKVKKLEYELYP
    NCTC8325        DAIGQAYHSGDTITGSTVHYVDSGMDTGEIIEQRKCDIRPDDSKEQLEEKVKKLEYELYP
    Newman          DAIGQAYHSGDTITGSTVHYVDSGMDTGEIIEQRKCDIRPDDSKEQLEEKVKKLEYELYP
    USA300_FPR3757  DAIGQAYHSGDTITGSTVHYVDSGMDTGEIIEQRKCDIRPDDSKEQLEEKVKKLEYELYP
                    **********************.***********:*************************

    COL             SVIAKIVK
    N315            SVIAKIVK
    NCTC8325        SVIAKIVK
    Newman          SVIAKIVK
    USA300_FPR3757  SVIAKIVK
                    ********