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Summary[edit source | edit]

  • pan ID?: SAUPAN003479000
  • symbol?: pyrP
  • description?: uracil permease

      descriptions from strain specific annotations:

    • uracil permease
    • NCS family uracil:cation symporter
    • putative uracil permease
    • uracil permease (Uracil transporter)
  • strand?: +
  • coordinates?: 3818239..3819555
  • synteny block?: BlockID0025580
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1211 (uraA)
    N315:
    SA1042 (pyrP)
    NCTC8325:
    Newman:
    NWMN_1110 (pyrP)
    USA300_FPR3757:
    04-02981:
    SA2981_1157 (pyrP)
    08BA02176:
    C248_1228 (pyrP)
    11819-97:
    MS7_1156 (pyrP)
    71193:
    ST398NM01_1196
    ECT-R 2:
    ECTR2_1054
    ED133:
    SAOV_1202
    ED98:
    SAAV_1170 (uraA)
    HO 5096 0412:
    SAEMRSA15_10320 (pyrP)
    JH1:
    SaurJH1_1283
    JH9:
    SaurJH9_1258
    JKD6008:
    SAA6008_01153 (uraA)
    JKD6159:
    SAA6159_01052 (uraA)
    LGA251:
    SARLGA251_11100 (pyrP)
    M013:
    M013TW_1134
    MRSA252:
    SAR1175 (pyrP)
    MSHR1132:
    SAMSHR1132_10400
    MSSA476:
    SAS1133
    Mu3:
    SAHV_1189 (pyrP)
    Mu50:
    SAV1199 (pyrP)
    MW2:
    MW1082 (pyrP)
    RF122:
    SAB1063 (pyrP)
    ST398:
    SAPIG1196
    T0131:
    SAT0131_01246
    TCH60:
    HMPREF0772_12033 (pyrP)
    TW20:
    SATW20_11930 (pyrP)
    USA300_TCH1516:
    USA300HOU_1137 (pyrP)
    VC40:
    SAVC_05160

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MQNDEMFERTVKPVLDVNEKPQPAQWAFLSLQHLFAMFGATVLVPFLTGLPISAALLASG
    N315            MQNDEMFERTVKPVLDVNEKPQPAQWAFLSLQHLFAMFGATVLVPFLTGLPISAALLASG
    NCTC8325        MQNDEMFERTVKPVLDVNEKPQPAQWAFLSLQHLFAMFGATVLVPFLTGLPISAALLASG
    Newman          MQNDEMFERTVKPVLDVNEKPQPAQWAFLSLQHLFAMFGATVLVPFLTGLPISAALLASG
    USA300_FPR3757  MQNDEMFERTVKPVLDVNEKPQPAQWAFLSLQHLFAMFGATVLVPFLTGLPISAALLASG
                    ************************************************************

    COL             IGTLLYILITKAQIPAYLGSSFAFITPIITGLSTHSLGDMLVALFMSGVMYVIIGILIKL
    N315            IGTLLYILITKAQIPAYLGSSFAFITPIITGLSTHSLGDMLVALFMSGVMYVIIGILIKL
    NCTC8325        IGTLLYILITKAQIPAYLGSSFAFITPIITGLSTHSLGDMLVALFMSGVMYVIIGILIKL
    Newman          IGTLLYILITKAQIPAYLGSSFAFITPIITGLSTHSLGDMLVALFMSGVMYVIIGILIKL
    USA300_FPR3757  IGTLLYILITKAQIPAYLGSSFAFITPIITGLSTHSLGDMLVALFMSGVMYVIIGILIKL
                    ************************************************************

    COL             SGTAWLMKLLPPVVVGPVIMVIGLSLAPTAVNMAMYENPGDMKGYNISFLIVAMITLLVT
    N315            SGTAWLMKLLPPVVVGPVIMVIGLSLAPTAVNMAMYENPGDMKGYNISFLIVAMITLLVT
    NCTC8325        SGTAWLMKLLPPVVVGPVIMVIGLSLAPTAVNMAMYENPGDMKGYNISFLIVAMITLLVT
    Newman          SGTAWLMKLLPPVVVGPVIMVIGLSLAPTAVNMAMYENPGDMKGYNISFLIVAMITLLVT
    USA300_FPR3757  SGTAWLMKLLPPVVVGPVIMVIGLSLAPTAVNMAMYENPGDMKGYNISFLIVAMITLLVT
                    ************************************************************

    COL             IVVQGFFKGFLSLIPVLVGIIVGYVVAIFMGIVKFDAIMSAKWIDFPHIYLPFKDYVPSF
    N315            IVVQGFFKGFLSLIPVLVGIIVGYVVAIFMGIVKFDAIMSAKWIDFPHIYLPFKDYVPSF
    NCTC8325        IVVQGFFKGFLSLIPVLVGIIVGYVVAIFMGIVKFDAIMSAKWIDFPHIYLPFKDYVPSF
    Newman          IVVQGFFKGFLSLIPVLVGIIVGYVVAIFMGIVKFDAIMSAKWIDFPHIYLPFKDYVPSF
    USA300_FPR3757  IVVQGFFKGFLSLIPVLVGIIVGYVVAIFMGIVKFDAIMSAKWIDFPHIYLPFKDYVPSF
                    ************************************************************

    COL             HLGLVLVMIPIVFVTVSEHIGHQMVLNKIVGRNFFEKPGLDKSIIGDGVSTMFASIIGGP
    N315            HLGLVLVMIPIVFVTVSEHIGHQMVLNKIVGRNFFEKPGLDKSIIGDGVSTMFASIIGGP
    NCTC8325        HLGLVLVMIPIVFVTVSEHIGHQMVLNKIVGRNFFEKPGLDKSIIGDGVSTMFASIIGGP
    Newman          HLGLVLVMIPIVFVTVSEHIGHQMVLNKIVGRNFFEKPGLDKSIIGDGVSTMFASIIGGP
    USA300_FPR3757  HLGLVLVMIPIVFVTVSEHIGHQMVLNKIVGRNFFEKPGLDKSIIGDGVSTMFASIIGGP
                    ************************************************************

    COL             PSTTYGENIGVLAITRIYSIYVIGGAAVIAIVLAFIGKFTALISSIPTPVMGGVSILLFG
    N315            PSTTYGENIGVLAITRIYSIYVIGGAAVIAIVLAFIGKFTALISSIPTPVMGGVSILLFG
    NCTC8325        PSTTYGENIGVLAITRIYSIYVIGGAAVIAIVLAFIGKFTALISSIPTPVMGGVSILLFG
    Newman          PSTTYGENIGVLAITRIYSIYVIGGAAVIAIVLAFIGKFTALISSIPTPVMGGVSILLFG
    USA300_FPR3757  PSTTYGENIGVLAITRIYSIYVIGGAAVIAIVLAFIGKFTALISSIPTPVMGGVSILLFG
                    ************************************************************

    COL             IIAASGLRMLVESKVDFANNRNLVIASVILVVGIGNLVFNLKEIGINLQIEGMALAALSG
    N315            IIAASGLRMLVESKVDFANNRNLVIASVILVVGIGNLVFNLKEIGINLQIEGMALAALSG
    NCTC8325        IIAASGLRMLVESKVDFANNRNLVIASVILVVGIGNLVFNLKEIGINLQIEGMALAALSG
    Newman          IIAASGLRMLVESKVDFANNRNLVIASVILVVGIGNLVFNLKEIGINLQIEGMALAALSG
    USA300_FPR3757  IIAASGLRMLVESKVDFANNRNLVIASVILVVGIGNLVFNLKEIGINLQIEGMALAALSG
                    ************************************************************

    COL             IILNLILPKEKKQNN
    N315            IILNLILPKEKKQNN
    NCTC8325        IILNLILPKEKKQNN
    Newman          IILNLILPKEKKQNN
    USA300_FPR3757  IILNLILPKEKKQNN
                    ***************