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Summary[edit source | edit]

  • pan ID?: SAUPAN003499000
  • symbol?: fmt
  • description?: methionyl-tRNA formyltransferase
  • strand?: +
  • coordinates?: 3838556..3839491
  • synteny block?: BlockID0025780
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1228 (fmt)
    N315:
    NCTC8325:
    Newman:
    NWMN_1126 (fmt)
    USA300_FPR3757:
    04-02981:
    SA2981_1174
    08BA02176:
    C248_1246
    11819-97:
    MS7_1174 (fmt)
    71193:
    ST398NM01_1215
    ECT-R 2:
    ECTR2_1072 (fmt)
    ED133:
    SAOV_1219
    ED98:
    SAAV_1188 (fmt)
    HO 5096 0412:
    SAEMRSA15_10490
    JH1:
    SaurJH1_1300
    JH9:
    SaurJH9_1275
    JKD6008:
    SAA6008_01171 (fmt)
    JKD6159:
    SAA6159_01069 (fmt)
    LGA251:
    SARLGA251_11270
    M013:
    M013TW_1154
    MRSA252:
    SAR1192
    MSHR1132:
    SAMSHR1132_10570
    MSSA476:
    SAS1150
    Mu3:
    SAHV_1206
    Mu50:
    SAV1216
    MW2:
    MW1099
    RF122:
    SAB1080 (fmt)
    ST398:
    SAPIG1215 (fmt)
    T0131:
    SAT0131_01265 (modC)
    TCH60:
    HMPREF0772_12016 (fmt)
    TW20:
    SATW20_12100
    USA300_TCH1516:
    USA300HOU_1153 (fmt2)
    VC40:
    SAVC_05245

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MTKIIFMGTPDFSTTVLEMLIAEHDVIAVVTQPDRPVGRKRVMTPPPVKKVAMKYDLPVY
    N315            MTKIIFMGTPDFSTTVLEMLIAEHDVIAVVTQPDRPVGRKRVMTPPPVKKVAMKYDLPVY
    NCTC8325        MTKIIFMGTPDFSTTVLEMLIAEHDVIAVVTQPDRPVGRKRVMTPPPVKKVAMKYDLPVY
    Newman          MTKIIFMGTPDFSTTVLEMLIAEHDVIAVVTQPDRPVGRKRVMTPPPVKKVAMKYDLPVY
    USA300_FPR3757  MTKIIFMGTPDFSTTVLEMLIAEHDVIAVVTQPDRPVGRKRVMTPPPVKKVAMKYDLPVY
                    ************************************************************

    COL             QPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPNLGAINVHASLLPKYRGGAPI
    N315            QPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPKYRGGAPI
    NCTC8325        QPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPNLGAINVHASLLPKYRGGAPI
    Newman          QPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPNLGAINVHASLLPKYRGGAPI
    USA300_FPR3757  QPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPNLGAINVHASLLPKYRGGAPI
                    ***************************************:********************

    COL             HQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGADLLKETL
    N315            HQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGADLLKETL
    NCTC8325        HQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGADLLKETL
    Newman          HQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGADLLKETL
    USA300_FPR3757  HQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGADLLKETL
                    ************************************************************

    COL             PSIIEGTNESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWPVAYTTMDDT
    N315            PSIIEGTNESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWPVAYTTMDDT
    NCTC8325        PSIIEGTNESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWPVAYTTMDDT
    Newman          PSIIEGTNESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWPVAYTTMDDT
    USA300_FPR3757  PSIIEGTNESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWPVAYTTMDDT
                    ************************************************************

    COL             NLKIYDAELVETNKINEPGTIIETTKKAIIVATNDNEAVAIKDMQLAGKKRMLAANYLSG
    N315            NLKIYDAELVETNKINEPGTIIETTKKAIIVATNDNEAVAIKDMQLAGKKRMLAANYLSG
    NCTC8325        NLKIYDAELVETNKINEPGTIIETTKKAIIVATNDNEAVAIKDMQLAGKKRMLAANYLSG
    Newman          NLKIYDAELVETNKINEPGTIIETTKKAIIVATNDNEAVAIKDMQLAGKKRMLAANYLSG
    USA300_FPR3757  NLKIYDAELVETNKINEPGTIIETTKKAIIVATNDNEAVAIKDMQLAGKKRMLAANYLSG
                    ************************************************************

    COL             AQNTLVGKKLI
    N315            AQNTLVGKKLI
    NCTC8325        AQNTLVGKKLI
    Newman          AQNTLVGKKLI
    USA300_FPR3757  AQNTLVGKKLI
                    ***********