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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003504000
- symbol?: rsgA
- synonym:
- description?: GTPase
- GTPase
- GTPase engC, putative
- ribosome small subunit-dependent GTPase A
- putative ribosome biogenesis GTPase RsgA
- Ribosome small subunit-stimulated GTPase EngC
- RsgA, truncated ribosome small subunit-dependent GTPase A
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3844981..3845437
- synteny block?: BlockID0025830
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1179 (engC)
08BA02176:
C248_1251
11819-97:
MS7_1179 (rsgA)
6850:
RSAU_001103 (engC)
71193:
ST398NM01_1220
ECT-R 2:
ECTR2_1077 (rsgA)
ED133:
SAOV_1224
ED98:
SAAV_1193
HO 5096 0412:
SAEMRSA15_10540
JH1:
SaurJH1_1305
JH9:
SaurJH9_1280
JKD6008:
SAA6008_01176 (rsgA)
JKD6159:
SAA6159_01074 (rsgA)
LGA251:
SARLGA251_11320 (rsgA)
M013:
M013TW_1159
MRSA252:
SAR1197
MSHR1132:
SAMSHR1132_10620
MSSA476:
SAS1155
Mu3:
SAHV_1211
Mu50:
SAV1221
MW2:
MW1104
RF122:
SAB1085
ST398:
SAPIG1220 (rsgA)
T0131:
SAT0131_01270
TCH60:
HMPREF0772_12011 (rsgA)
TW20:
SATW20_12150 (rsgA)
USA300_TCH1516:
USA300HOU_1158 (engC)
VC40:
SAVC_05270 (rsgA)
⊟Genome Viewer[edit | edit source]
COL | |
N315 | |
NCTC8325 | |
Newman | |
USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKTGRIVKSISGVYQVDVNGERFNTKPRGLFRKKKFSPVVGDIVEFEVQNINEGYIHQVF
N315 MKTGRIVKSISGVYQVDVNGERFNTKPRGLFRKKKFSPVVGDIVEFEVQNINEGYIHQVF
NCTC8325 MKTGRIVKSISGVYQVDVNGERFNTKPRGLFRKKKFSPVVGDIVEFEVQNINEGYIHQVF
Newman MKTGRIVKSISGVYQVDVNGERFNTKPRGLFRKKKFSPVVGDIVEFEVQNINEGYIHQVF
USA300_FPR3757 MKTGRIVKSISGVYQVDVNGERFNTKPRGLFRKKKFSPVVGDIVEFEVQNINEGYIHQVF
************************************************************
COL ERENELKRPPVSNIDTLVIVMSAVEPNFSTQLLDRFLVIAHSYQLNARILVTKKDKTPIE
N315 ERKNELKRPPVSNIDTLVIVMSAVEPNFSTQLLDRFLVIAHSYQLNARVLVTKKDKTPIE
NCTC8325 ERENELKRPPVSNIDTLVIVMSAVEPNFSTQLLDRFLVIAHSYQLNARILVTKKDKTPIE
Newman ERENELKRPPVSNIDTLVIVMSAVEPNFSTQLLDRFLVIAHSYQLNARILVTKKDKTPIE
USA300_FPR3757 ERENELKRPPVSNIDTLVIVMSAVEPNFSTQLLDRFLVIAHSYQLNARILVTKKDKTPIE
**:*********************************************:***********
COL KQFEINELLKIYENIGYETEFIGNDDDRKKIVEAWPAGLIVLSGQSGVGKSTFLNHYRPE
N315 KQFEINELLKIYENIGYETEFIGNDDDRKKIVEAWPAGLIVLSGQSGVGKSTFLNHYRPE
NCTC8325 KQFEINELLKIYENIGYETEFIGNDDDRKKIVEAWPAGLIVLSGQSGVGKSTFLNHYRPE
Newman KQFEINELLKIYENIGYETEFIGNDDDRKKIVEAWPAGLIVLSGQSGVGKSTFLNHYRPE
USA300_FPR3757 KQFEINELLKIYENIGYETEFIGNDDDRKKIVEAWPAGLIVLSGQSGVGKSTFLNHYRPE
************************************************************
COL LNLETNDISKSLNRGKHTTRHVELFERQNGYIADTPGFSALDFDHIDKDEIKDYFLELNR
N315 LNLETNDISKSLNRGKHTTRHVELFERQNGYIADTPGFSALDFDHIDKDEIKDYFLELNR
NCTC8325 LNLETNDISKSLNRGKHTTRHVELFERQNGYIADTPGFSALDFDHIDKDEIKDYFLELNR
Newman LNLETNDISKSLNRGKHTTRHVELFERQNGYIADTPGFSALDFDHIDKDEIKDYFLELNR
USA300_FPR3757 LNLETNDISKSLNRGKHTTRHVELFERQNGYIADTPGFSALDFDHIDKDEIKDYFLELNR
************************************************************
COL YGETCKFRNCNHIKEPNCNVKHQLEIGNIAQFRYDHYLQLFNEISNRKVRY
N315 YGETCKFRNCNHIKEPNCNVKHQLEIGNIAQFRYDHYLQLFNEISNRKVRY
NCTC8325 YGETCKFRNCNHIKEPNCNVKHQLEIGNIAQFRYDHYLQLFNEISNRKVRY
Newman YGETCKFRNCNHIKEPNCNVKHQLEIGNIAQFRYDHYLQLFNEISNRKVRY
USA300_FPR3757 YGETCKFRNCNHIKEPNCNVKHQLEIGNIAQFRYDHYLQLFNEISNRKVRY
***************************************************