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Summary[edit source | edit]

  • pan ID?: SAUPAN003561000
  • symbol?: uppS
  • description?: undecaprenyl pyrophosphate synthase

      descriptions from strain specific annotations:

    • undecaprenyl pyrophosphate synthase
    • UDP pyrophosphate synthase
    • UDP diphosphate synthase
    • Undecaprenyl pyrophosphate synthetase
    • di-trans,poly-cis-decaprenylcistransferase
    • undecaprenyl diphosphate synthase
  • strand?: +
  • coordinates?: 3894635..3895405
  • synteny block?: BlockID0026380
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1279 (uppS)
    N315:
    SA1103 (uppS)
    NCTC8325:
    Newman:
    NWMN_1170 (uppS)
    USA300_FPR3757:
    04-02981:
    SA2981_1218 (uppS)
    08BA02176:
    C248_1293 (uppS)
    11819-97:
    MS7_1218 (uppS)
    71193:
    ST398NM01_1262
    ECT-R 2:
    ECTR2_1116 (uppS)
    ED133:
    SAOV_1262
    ED98:
    SAAV_1235 (uppS)
    HO 5096 0412:
    SAEMRSA15_10930 (uppS)
    JH1:
    SaurJH1_1346
    JH9:
    SaurJH9_1320
    JKD6008:
    SAA6008_01215 (uppS)
    JKD6159:
    SAA6159_01115 (uppS)
    LGA251:
    SARLGA251_11710 (uppS)
    M013:
    M013TW_1200
    MRSA252:
    SAR1236 (uppS)
    MSHR1132:
    SAMSHR1132_11030
    MSSA476:
    SAS1194
    Mu3:
    SAHV_1250 (uppS)
    Mu50:
    SAV1260 (uppS)
    MW2:
    MW1143 (uppS)
    RF122:
    SAB1122 (uppS)
    ST398:
    SAPIG1262 (uppS)
    T0131:
    SAT0131_01313
    TCH60:
    HMPREF0772_11969 (uppS)
    TW20:
    SATW20_12540 (uppS)
    USA300_TCH1516:
    USA300HOU_1192 (uppS)
    VC40:
    SAVC_05465

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MFKKLINKKNTINNYNEELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKI
    N315            MFKKLINKKNTINNYNEELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKI
    NCTC8325        MFKKLINKKNTINNYNEELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKI
    Newman          MFKKLINKKNTINNYNEELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKI
    USA300_FPR3757  MFKKLINKKNTINNYNEELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKI
                    ************************************************************

    COL             TRVASDIGVKYLTLYAFSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFT
    N315            TRIASDIGVKYLTLYAFSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFT
    NCTC8325        TRVASDIGVKYLTLYAFSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFT
    Newman          TRVASDIGVKYLTLYAFSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFT
    USA300_FPR3757  TRVASDIGVKYLTLYAFSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFT
                    **:*********************************************************

    COL             DKLPKSTIEAINNAKEKTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIID
    N315            DKLPKSTIEAINNAKEKTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIID
    NCTC8325        DKLPKSTIEAINNAKEKTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIID
    Newman          DKLPKSTIEAINNAKEKTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIID
    USA300_FPR3757  DKLPKSTIEAINNAKEKTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIID
                    ************************************************************

    COL             ETYINNHLMTKDYPDPELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCI
    N315            ETYINNHLMTKDYPDPELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCI
    NCTC8325        ETYINNHLMTKDYPDPELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCI
    Newman          ETYINNHLMTKDYPDPELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCI
    USA300_FPR3757  ETYINNHLMTKDYPDPELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCI
                    ************************************************************

    COL             KIYQSRQRRFGGLSEE
    N315            KIYQSRQRRFGGLSEE
    NCTC8325        KIYQSRQRRFGGLSEE
    Newman          KIYQSRQRRFGGLSEE
    USA300_FPR3757  KIYQSRQRRFGGLSEE
                    ****************