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Summary[edit source | edit]

  • pan ID?: SAUPAN003626000
  • symbol?: glnA
  • description?: glutamine-ammonia ligase

      descriptions from strain specific annotations:

    • glutamine-ammonia ligase
    • glutamine synthetase, type I
    • Glutamine synthetase type I
    • glutamine synthetase FemC
    • glutamate--ammonia ligase
  • strand?: +
  • coordinates?: 3963513..3964868
  • synteny block?: BlockID0026960
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1329 (femC)
    N315:
    SA1150 (glnA)
    NCTC8325:
    Newman:
    NWMN_1217 (glnA)
    USA300_FPR3757:
    04-02981:
    SA2981_1266 (glnA)
    08BA02176:
    C248_1343 (glnA)
    11819-97:
    MS7_1266 (glnA)
    71193:
    ST398NM01_1311
    ECT-R 2:
    ECTR2_1166 (glnA)
    ED133:
    SAOV_1310 (glnA)
    ED98:
    SAAV_1283 (femC)
    HO 5096 0412:
    SAEMRSA15_11430 (glnA)
    JH1:
    SaurJH1_1394
    JH9:
    SaurJH9_1368
    JKD6008:
    SAA6008_01263 (glnA)
    JKD6159:
    SAA6159_01163 (glnA)
    LGA251:
    SARLGA251_12190 (glnA)
    M013:
    M013TW_1250
    MRSA252:
    SAR1284 (glnA)
    MSHR1132:
    SAMSHR1132_11510
    MSSA476:
    SAS1242
    Mu3:
    SAHV_1299 (glnA)
    Mu50:
    SAV1310 (glnA)
    MW2:
    MW1192 (glnA)
    RF122:
    SAB1172 (glnA)
    ST398:
    SAPIG1311 (glnA)
    T0131:
    SAT0131_01366
    TCH60:
    HMPREF0772_11917 (glnA)
    TW20:
    SATW20_13020 (glnA)
    USA300_TCH1516:
    USA300HOU_1240 (glnA)
    VC40:
    SAVC_05740

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             -----MPKRTFTKDDIRKFAEEENVRYLRLQFTDILGTIKNVEVPVSQLEKVLDNEMMFD
    N315            -----MPKRTFTKEDIRKFAEEENVRYLRLQFTDILGTIKNVEVPVSQLEKVLDNEMMFD
    NCTC8325        -----MPKRTFTKDDIRKFAEEENVRYLRLQFTDILGTIKNVEVPVSQLEKVLDNEMMFD
    Newman          MEDFKMPKRTFTKDDIRKFAEEENVRYLRLQFTDILGTIKNVEVPVSQLEKVLDNEMMFD
    USA300_FPR3757  -----MPKRTFTKDDIRKFAEEENVRYLRLQFTDILGTIKNVEVPVSQLEKVLDNEMMFD
                         ********:**********************************************

    COL             GSSIEGFVRIEESDMYLHPDLDTWVIFPWTAGQGKVARLICDVYKTDGTPFEGDPRANLK
    N315            GSSIEGFVRIEESDMYLHPDLDTWVIFPWTAGQGKVARLICDVYKTDGTPFEGDPRANLK
    NCTC8325        GSSIEGFVRIEESDMYLHPDLDTWVIFPWTAGQGKVARLICDVYKTDGTPFEGDPRANLK
    Newman          GSSIEGFVRIEESDMYLHPDLDTWVIFPWTAGQGKVARLICDVYKTDGTPFEGDPRANLK
    USA300_FPR3757  GSSIEGFVRIEESDMYLHPDLDTWVIFPWTAGQGKVARLICDVYKTDGTPFEGDPRANLK
                    ************************************************************

    COL             RVLKEMEDLGFTDFNLGPEPEFFLFKLDEKGEPTLELNDDGGYFDLAPTDLGENCRRDIV
    N315            RVLKEMEDLGFTDFNLGPEPEFFLFKLDEKGEPTLELNDDGGYFDLAPTDLGENCRRDIV
    NCTC8325        RVLKEMEDLGFTDFNLGPEPEFFLFKLDEKGEPTLELNDDGGYFDLAPTDLGENCRRDIV
    Newman          RVLKEMEDLGFTDFNLGPEPEFFLFKLDEKGEPTLELNDDGGYFDLAPTDLGENCRRDIV
    USA300_FPR3757  RVLKEMEDLGFTDFNLGPEPEFFLFKLDEKGEPTLELNDDGGYFDLAPTDLGENCRRDIV
                    ************************************************************

    COL             LELEDMGFDIEASHHEVAPGQHEIDFKYADAVTACDNIQTFKLVVKTIARKHNLHATFMP
    N315            LELEDMGFDIEASHHEVAPGQHEIDFKYADAVTACDNIQTFKLVVKTIARKHNLHATFMP
    NCTC8325        LELEDMGFDIEASHHEVAPGQHEIDFKYADAVTACDNIQTFKLVVKTIARKHNLHATFMP
    Newman          LELEDMGFDIEASHHEVAPGQHEIDFKYADAVTACDNIQTFKLVVKTIARKHNLHATFMP
    USA300_FPR3757  LELEDMGFDIEASHHEVAPGQHEIDFKYADAVTACDNIQTFKLVVKTIARKHNLHATFMP
                    ************************************************************

    COL             KPLFGVNGSGMHFNVSLFKGKENAFFDPNTEMGLTETAYQFTAGVLKNARGFTAVCNPLV
    N315            KPLFGVNGSGMHFNVSLFKGKENAFFDPNTEMGLTETAYQFTAGVLKNARGFTAVCNPLV
    NCTC8325        KPLFGVNGSGMHFNVSLFKGKENAFFDPNTEMGLTETAYQFTAGVLKNARGFTAVCNPLV
    Newman          KPLFGVNGSGMHFNVSLFKGKENAFFDPNTEMGLTETAYQFTAGVLKNARGFTAVCNPLV
    USA300_FPR3757  KPLFGVNGSGMHFNVSLFKGKENAFFDPNTEMGLTETAYQFTAGVLKNARGFTAVCNPLV
                    ************************************************************

    COL             NSYKRLVPGYEAPCYIAWSGKNRSPLIRVPSSRGLSTRIEVRSVDPAANPYMALAAILEA
    N315            NSYKRLVPGYEAPCYIAWSGKNRSPLIRVPSSRGLSTRIEVRSVDPAANPYMALAAILEA
    NCTC8325        NSYKRLVPGYEAPCYIAWSGKNRSPLIRVPSSRGLSTRIEVRSVDPAANPYMALAAILEA
    Newman          NSYKRLVPGYEAPCYIAWSGKNRSPLIRVPSSRGLSTRIEVRSVDPAANPYMALAAILEA
    USA300_FPR3757  NSYKRLVPGYEAPCYIAWSGKNRSPLIRVPSSRGLSTRIEVRSVDPAANPYMALAAILEA
                    ************************************************************

    COL             GLDGIKNKLKVPEPVNQNIYEMNREEREAVGIQDLPSTLYTALKAMRENEVIKKALGNHI
    N315            GLDGIKNKLKVPEPVNQNIYEMNREEREAVGIQDLPSTLYTALKAMRENEVIKKALGNHI
    NCTC8325        GLDGIKNKLKVPEPVNQNIYEMNREEREAVGIQDLPSTLYTALKAMRENEVIKKALGNHI
    Newman          GLDGIKNKLKVPEPVNQNIYEMNREEREAVGIQDLPSTLYTALKAMRENEVIKKALGNHI
    USA300_FPR3757  GLDGIKNKLKVPEPVNQNIYEMNREEREAVGIQDLPSTLYTALKAMRENEVIKKALGNHI
                    ************************************************************

    COL             YNQFINSKSIEWDYYRTQVSEWERDQYMKQY
    N315            YNQFINSKSIEWDYYRTQVSEWERDQYMKQY
    NCTC8325        YNQFINSKSIEWDYYRTQVSEWERDQYMKQY
    Newman          YNQFINSKSIEWDYYRTQVSEWERDQYMKQY
    USA300_FPR3757  YNQFINSKSIEWDYYRTQVSEWERDQYMKQY
                    *******************************