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Summary[edit source | edit]

  • pan ID?: SAUPAN003807000
  • symbol?: asd
  • description?: aspartate semialdehyde dehydrogenase
  • strand?: +
  • coordinates?: 4098450..4099439
  • synteny block?: BlockID0028640
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1429 (asd)
    N315:
    SA1226 (asd)
    NCTC8325:
    Newman:
    NWMN_1305 (asd)
    USA300_FPR3757:
    04-02981:
    SA2981_1348 (asd)
    08BA02176:
    C248_1433 (asd)
    11819-97:
    MS7_1350 (asd)
    71193:
    ST398NM01_1395
    ECT-R 2:
    ECTR2_1251 (asd)
    ED133:
    SAOV_1403 (asd)
    ED98:
    SAAV_1377 (asd)
    HO 5096 0412:
    SAEMRSA15_12570 (asd)
    JH1:
    SaurJH1_1484
    JH9:
    SaurJH9_1455
    JKD6008:
    SAA6008_01358 (asd)
    JKD6159:
    SAA6159_01260 (asd)
    LGA251:
    SARLGA251_13100 (asd)
    M013:
    M013TW_1338
    MRSA252:
    SAR1406 (asd)
    MSHR1132:
    SAMSHR1132_12350
    MSSA476:
    SAS1335
    Mu3:
    SAHV_1382 (asd)
    Mu50:
    SAV1394 (asd)
    MW2:
    MW1282 (asd)
    RF122:
    SAB1249 (asd)
    ST398:
    SAPIG1395 (asd)
    T0131:
    SAT0131_01468
    TCH60:
    HMPREF0772_11815 (asd)
    TW20:
    SATW20_13930 (asd)
    USA300_TCH1516:
    USA300HOU_1329 (asd)
    VC40:
    SAVC_06215

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MTKLAVVGATGLVGTKMLETLNRKNIPFDELVLFSSARSAGQEVEFQGKTYTVQELTDAR
    N315            MTKLAVVGATGLVGTKMLETLNRKNIPFDELVLFSSARSAGQEVEFQEKTYTVQELTDAR
    NCTC8325        MTKLAVVGATGLVGTKMLETLNRKNIPFDELVLFSSARSAGQEVEFQGKTYTVQELTDAR
    Newman          MTKLAVVGATGLVGTKMLETLNRKNIPFDELVLFSSARSAGQEVEFQGKTYTVQELTDAR
    USA300_FPR3757  MTKLAVVGATGLVGTKMLETLNRKNIPFDELVLFSSARSAGQEVEFQGKTYTVQELTDAR
                    *********************************************** ************

    COL             ASEHFDYVLMSAGGGTSEHFAPLFEKAGAIVIDNSSQWRMAEDIDLIVPEVNEPTFTRGI
    N315            ASEHFDYVLMSAGGGTSEHFAPLFEKAGAIVIDNSSQWRMAEDIDLIVPEVNEPTFTRGI
    NCTC8325        ASEHFDYVLMSAGGGTSEHFAPLFEKAGAIVIDNSSQWRMAEDIDLIVPEVNEPTFTRGI
    Newman          ASEHFDYVLMSAGGGTSEHFAPLFEKAGAIVIDNSSQWRMAEDIDLIVPEVNEPTFTRGI
    USA300_FPR3757  ASEHFDYVLMSAGGGTSEHFAPLFEKAGAIVIDNSSQWRMAEDIDLIVPEVNEPTFTRGI
                    ************************************************************

    COL             IANPNCSTIQSVVPLKVLQDAYGLKRVAYTTYQAVSGSGMKGKKDLAEGVNGKAPEAYPH
    N315            IANPNCSTIQSVVPLKVLQDAYGLKRVAYTTYQAVSGSGMKGKKDLAEGVNGKAPEAYPH
    NCTC8325        IANPNCSTIQSVVPLKVLQDAYGLKRVAYTTYQAVSGSGMKGKKDLAEGVNGKAPEAYPH
    Newman          IANPNCSTIQSVVPLKVLQDAYGLKRVAYTTYQAVSGSGMKGKKDLAEGVNGKAPEAYPH
    USA300_FPR3757  IANPNCSTIQSVVPLKVLQDAYGLKRVAYTTYQAVSGSGMKGKKDLAEGVNGKAPEAYPH
                    ************************************************************

    COL             PIYNNVLPHIDVFLENGYTKEEQKMIDETRKILNAPDLKVTATCARVPVQDSHSVEIDVT
    N315            PIYNNVLPHIDVFLENGYTKEEQKMIDETRKILNAPDLKVTATCARVPVQDSHSVEIDVT
    NCTC8325        PIYNNVLPHIDVFLENGYTKEEQKMIDETRKILNAPDLKVTATCARVPVQDSHSVEIDVT
    Newman          PIYNNVLPHIDVFLENGYTKEEQKMIDETRKILNAPDLKVTATCARVPVQDSHSVEIDVT
    USA300_FPR3757  PIYNNVLPHIDVFLENGYTKEEQKMIDETRKILNAPDLKVTATCARVPVQDSHSVEIDVT
                    ************************************************************

    COL             LDKETTAEDIKALFDQDDRVVLVDNPENNEYPMAINSTNKDEVFVGRIRRDDSLENTFHV
    N315            LDKETTAEDIKALFDQDDRVVLVDNPENNEYPMAINSTNKDEVFVGRIRRDDSLENTFHV
    NCTC8325        LDKETTAEDIKALFDQDDRVVLVDNPENNEYPMAINSTNKDEVFVGRIRRDDSLENTFHV
    Newman          LDKETTAEDIKALFDQDDRVVLVDNPENNEYPMAINSTNKDEVFVGRIRRDDSLENTFHV
    USA300_FPR3757  LDKETTAEDIKALFDQDDRVVLVDNPENNEYPMAINSTNKDEVFVGRIRRDDSLENTFHV
                    ************************************************************

    COL             WCTSDNLLKGAALNAVQVLEQVMRLKGAN
    N315            WCTSDNLLKGAALNAVQVLEQVMRLKGAN
    NCTC8325        WCTSDNLLKGAALNAVQVLEQVMRLKGAN
    Newman          WCTSDNLLKGAALNAVQVLEQVMRLKGAN
    USA300_FPR3757  WCTSDNLLKGAALNAVQVLEQVMRLKGAN
                    *****************************