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Summary[edit source | edit]

  • pan ID?: SAUPAN003892000
  • symbol?: ilvA1
  • description?: threonine dehydratase

      descriptions from strain specific annotations:

    • threonine dehydratase
    • Threonine dehydratase, catabolic
    • threonine dehydratase, IlvA
    • catabolic threonine dehydratase
    • putative threonine dehydratase
    • Threonine dehydratase catabolic
    • threonine ammonia-lyase
  • strand?: -
  • coordinates?: 4213153..4214193
  • synteny block?: BlockID0029380
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1477 (ilvA1)
    N315:
    NCTC8325:
    Newman:
    NWMN_1348 (ilvA)
    USA300_FPR3757:
    04-02981:
    SA2981_1393 (ilvA)
    08BA02176:
    C248_1477 (tdcB)
    11819-97:
    MS7_1394
    71193:
    ST398NM01_1437
    ECT-R 2:
    ECTR2_1292 (ilvA)
    ED133:
    SAOV_1447 (tdcB)
    ED98:
    SAAV_1422 (ilvA1)
    HO 5096 0412:
    SAEMRSA15_13000 (tdcB)
    JH1:
    SaurJH1_1527
    JH9:
    SaurJH9_1498
    JKD6008:
    SAA6008_01406 (ilvA)
    JKD6159:
    SAA6159_01303 (ilvA)
    LGA251:
    SARLGA251_13530 (tdcB)
    M013:
    M013TW_1385
    MRSA252:
    SAR1450 (tdcB)
    MSHR1132:
    SAMSHR1132_12790
    MSSA476:
    SAS1381
    Mu3:
    SAHV_1426
    Mu50:
    SAV1438
    MW2:
    MW1327
    RF122:
    SAB1303c (tdcB)
    ST398:
    SAPIG1437 (ilvA)
    T0131:
    SAT0131_01526
    TCH60:
    HMPREF0772_11768 (ilvA2)
    TW20:
    SATW20_14380 (tdcB)
    USA300_TCH1516:
    USA300HOU_1375 (ilvA1)
    VC40:
    SAVC_06445

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MTTNTVTLQTAHIVSLGDIEEAKASIKPFIRRTPLIKSMYLSQSITKGNVFLKLENMQFT
    N315            MTTNTVTLQTAHIVSLGDIEEAKASIKPFIRRTPLIKSMYLSQNITKGNVYLKLENMQFT
    NCTC8325        MTTNTVTLQTAHIVSLGDIEEAKASIKPFIRRTPLIKSMYLSQSITKGNVFLKLENMQFT
    Newman          MTTNTVTLQTAHIVSLGDIEEAKASIKPFIRRTPLIKSMYLSQSITKGNVFLKLENMQFT
    USA300_FPR3757  MTTNTVTLQTAHIVSLGDIEEAKASIKPFIRRTPLIKSMYLSQSITKGNVFLKLENMQFT
                    *******************************************.******:*********

    COL             GSFKFRGASNKINHLTDEQKEKGIIAASAGNHAQGVALTAKLLGIDATIVMPETAPQAKQ
    N315            GSFKFRGASNKINHLSDEQKAKGIIGASAGNHAQGVALTAKLLGIDATIVMPETAPIAKQ
    NCTC8325        GSFKFRGASNKINHLTDEQKEKGIIAASAGNHAQGVALTAKLLGIDATIVMPETAPQAKQ
    Newman          GSFKFRGASNKINHLTDEQKEKGIIAASAGNHAQGVALTAKLLGIDATIVMPETAPQAKQ
    USA300_FPR3757  GSFKFRGASNKINHLTDEQKEKGIIAASAGNHAQGVALTAKLLGIDATIVMPETAPQAKQ
                    ***************:**** ****.****************************** ***

    COL             QATKGYGAKVILKGKNFNETRLYMEELAKENGMTIVHPYDDKFVMAGQGTIGLEILDDIW
    N315            NATKGYGAKVILKGKNFNETRLYMEELAKENGMTIVHPYDDKFVMAGQGTIGLEILDDIW
    NCTC8325        QATKGYGAKVILKGKNFNETRLYMEELAKENGMTIVHPYDDKFVMAGQGTIGLEILDDIW
    Newman          QATKGYGAKVILKGKNFNETRLYMEELAKENGMTIVHPYDDKFVMAGQGTIGLEILDDIW
    USA300_FPR3757  QATKGYGAKVILKGKNFNETRLYMEELAKENGMTIVHPYDDKFVMAGQGTIGLEILDDIW
                    :***********************************************************

    COL             NVNTVIVPVGGGGLIAGIATALKSFNPSIHIIGVQSENVHGMAESFYKRDLTEHRVDSTI
    N315            NVNTVIVPVGGGGLIAGIATALKSFNPSIHIIGVQAENVHGMAESFYKRALTEHREDSTI
    NCTC8325        NVNTVIVPVGGGGLIAGIATALKSFNPSIHIIGVQSENVHGMAESFYKRDLTEHRVDSTI
    Newman          NVNTVIVPVGGGGLIAGIATALKSFNPSIHIIGVQSENVHGMAESFYKRDLTEHRVDSTI
    USA300_FPR3757  NVNTVIVPVGGGGLIAGIATALKSFNPSIHIIGVQSENVHGMAESFYKRDLTEHRVDSTI
                    ***********************************:************* ***** ****

    COL             ADGCDVKVPGEQTYEVVKHLVDEFILVTEEEIEHAMKDLMQRAKIITEGAGALPTAAILS
    N315            ADGCDVKVPGEKTYEVVKHLVDEFILVSEEEIEHAMQDLMQRAKIITEGAGALPTAAILS
    NCTC8325        ADGCDVKVPGEQTYEVVKHLVDEFILVTEEEIEHAMKDLMQRAKIITEGAGALPTAAILS
    Newman          ADGCDVKVPGEQTYEVVKHLVDEFILVTEEEIEHAMKDLMQRAKIITEGAGALPTAAILS
    USA300_FPR3757  ADGCDVKVPGEQTYEVVKHLVDEFILVTEEEIEHAMKDLMQRAKIITEGAGALPTAAILS
                    ***********:***************:********:***********************

    COL             GKINNKWLEDKNVVALVSGGNVDLTRVSGVIEHGLNIADTSKGVVG
    N315            GKIDKKWLEGKNVVALVSGGNVDLTRVSGVIEHGLNIADTSKGVVG
    NCTC8325        GKINNKWLEDKNVVALVSGGNVDLTRVSGVIEHGLNIADTSKGVVG
    Newman          GKINNKWLEDKNVVALVSGGNVDLTRVSGVIEHGLNIADTSKGVVG
    USA300_FPR3757  GKINNKWLEDKNVVALVSGGNVDLTRVSGVIEHGLNIADTSKGVVG
                    ***::****.************************************