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Summary[edit source | edit]

  • pan ID?: SAUPAN004036000
  • symbol?: proC
  • description?: pyrroline-5-carboxylate reductase

      descriptions from strain specific annotations:

    • pyrroline-5-carboxylate reductase
    • pyrrolidine-5-carboxylate reductase
    • putative pyrroline-5-carboxylate reductase
  • strand?: +
  • coordinates?: 4324471..4325296
  • synteny block?: BlockID0030730
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1546 (proC)
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1460
    08BA02176:
    C248_1543
    11819-97:
    MS7_1520 (proC)
    71193:
    ST398NM01_1569
    ECT-R 2:
    ECTR2_1354 (proC)
    ED133:
    SAOV_1505
    ED98:
    SAAV_1493 (proC)
    HO 5096 0412:
    SAEMRSA15_14250
    JH1:
    SaurJH1_1591
    JH9:
    SaurJH9_1560
    JKD6008:
    SAA6008_01472 (proC)
    JKD6159:
    SAA6159_01432 (proC)
    LGA251:
    SARLGA251_14110
    M013:
    M013TW_1517
    MRSA252:
    SAR1579
    MSHR1132:
    SAMSHR1132_13420
    MSSA476:
    SAS1443
    Mu3:
    SAHV_1491
    Mu50:
    SAV1503
    MW2:
    MW1457
    RF122:
    SAB1364
    ST398:
    SAPIG1569 (proC)
    T0131:
    SAT0131_01596
    TCH60:
    HMPREF0772_11638 (proC)
    TW20:
    SATW20_15010
    USA300_TCH1516:
    USA300HOU_1504
    VC40:
    SAVC_06765

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MKLVFYGAGNMAQAIFTGIINSSNLDANDIYLTNKSNEQALKAFAEKLGVNYSYDDATLL
    N315            MKLVFYGAGNMAQAIFTGIINSSNLDANDIYLTNKSNEQALKAFAEKLGVNYSYDDATLL
    NCTC8325        ----------MAQAIFTGIINSSNLDANDIYLTNKSNEQALKAFAEKLGVNYSYDDATLL
    Newman          MKLVFYGAGNMAQAIFTGIINSSNLDANDIYLTNKSNEQALKAFAEKLGVNYSYDDATLL
    USA300_FPR3757  ----------MAQAIFTGIINSSNLDANDIYLTNKSNEQALKAFAEKLGVNYSYDDATLL
                              **************************************************

    COL             KDADYVFLGTKPHDFDALATRIKPHITKDNCFISIMAGIPIDYIKQQLECQNPVARIMPN
    N315            KDADYVFLGTKPHDFDALATRIKPHITKDNCFISIMAGIPIDYIKQQLECQNPVARIMPN
    NCTC8325        KDADYVFLGTKPHDFDALATRIKPHITKDNCFISIMAGIPIDYIKQQLECQNPVARIMPN
    Newman          KDADYVFLGTKPHDFDALATRIKPHITKDNCFISIMAGIPIDYIKQQLECQNPVARIMPN
    USA300_FPR3757  KDADYVFLGTKPHDFDALATRIKPHITKDNCFISIMAGIPIDYIKQQLECQNPVARIMPN
                    ************************************************************

    COL             TNAQVGHSVTGISFSNNFDPKSKDEINDLVKAFGSVIEVSEDHLHQVTAITGSGPAFLYH
    N315            TNAQVGHSVTGISFSNNFDPKSKDEINDLVKAFGSVIEVSEDHLHQVTAITGSGPAFLYH
    NCTC8325        TNAQVGHSVTGISFSNNFDPKSKDEINDLVKAFGSVIEVSEDHLHQVTAITGSGPAFLYH
    Newman          TNAQVGHSVTGISFSNNFDPKSKDEINDLVKAFGSVIEVSEDHLHQVTAITGSGPAFLYH
    USA300_FPR3757  TNAQVGHSVTGISFSNNFDPKSKDEINDLVKAFGSVIEVSEDHLHQVTAITGSGPAFLYH
                    ************************************************************

    COL             VFEQYVKAGTKLGLEKEQVEESIRNLIIGTSKMIERSDLSMAQLRKNITSKGGTTQAGLD
    N315            VFEQYVKAGTKLGLEKEQVEESIRNLIIGTSKMIERSDLSMAQLRKNITSKGGTTQAGLD
    NCTC8325        VFEQYVKAGTKLGLEKEQVEESIRNLIIGTSKMIERSDLSMAQLRKNITSKGGTTQAGLD
    Newman          VFEQYVKAGTKLGLEKEQVEESIPNLIIGTSKMIETSELSMAQLKKKIPLKGVQNKPGLD
    USA300_FPR3757  VFEQYVKAGTKLGLEKEQVEESIRNLIIGTSKMIERSDLSMAQLRKNITSKGGTTQAGLD
                    *********************** *********** *:******:*:*. **  .:.***

    COL             TLSQYDLVSIFEDCLNAAVDRSIELSNIEDQ
    N315            TLSQYDLVSIFEDCLNAAVDRSIELSNVEDQ
    NCTC8325        TLSQYDLVSIFEDCLNAAVDRSIELSNIEDQ
    Newman          TLSQYDLVSIFEDCLNAAVDRSIELSNIEDQ
    USA300_FPR3757  TLSQYDLVSIFEDCLNAAVDRSIELSNIEDQ
                    ***************************:***