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Summary[edit source | edit]

  • pan ID?: SAUPAN004312000
  • symbol?: mutM
  • description?: formamidopyrimidine-DNA glycosylase

      descriptions from strain specific annotations:

    • formamidopyrimidine-DNA glycosylase
    • DNA-formamidopyrimidine glycosylase
    • formamidopyrimidine-DNA glycosidase
  • strand?: -
  • coordinates?: 4551699..4552571
  • synteny block?: BlockID0033360
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1736 (fpg)
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1648
    08BA02176:
    C248_1731
    11819-97:
    MS7_1696 (mutM)
    71193:
    ST398NM01_1743
    ECT-R 2:
    ECTR2_1529 (mutM)
    ED133:
    SAOV_1677
    ED98:
    SAAV_1679 (fpg)
    HO 5096 0412:
    SAEMRSA15_15990
    JH1:
    SaurJH1_1780
    JH9:
    SaurJH9_1746
    JKD6008:
    SAA6008_01656 (fpg)
    JKD6159:
    SAA6159_01613 (fpg)
    LGA251:
    SARLGA251_15810
    M013:
    M013TW_1702
    MRSA252:
    SAR1768
    MSHR1132:
    SAMSHR1132_15200
    MSSA476:
    SAS1617
    Mu3:
    SAHV_1675
    Mu50:
    SAV1689
    MW2:
    MW1632
    RF122:
    SAB1548c
    ST398:
    SAPIG1743 (mutM)
    T0131:
    SAT0131_01791
    TCH60:
    HMPREF0772_11462 (mutM)
    TW20:
    SATW20_16790
    USA300_TCH1516:
    USA300HOU_1676 (fpg)
    VC40:
    SAVC_07650

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT
    N315            MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT
    NCTC8325        MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT
    Newman          MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT
    USA300_FPR3757  MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT
                    ************************************************************

    COL             ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN
    N315            ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN
    NCTC8325        ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN
    Newman          ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN
    USA300_FPR3757  ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN
                    ************************************************************

    COL             DKKLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFSNEALTYYLNRIHQQSNKNKPIKQV
    N315            DKKLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFTNEALTYYLNRIHQQSNKNKPIKQV
    NCTC8325        DKKLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFSNEALTYYLNRIHQQSNKNKPIKQV
    Newman          DKKLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFSNEALTYYLNRIHQQSNKNKPIKQV
    USA300_FPR3757  DKKLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFSNEALTYYLNRIHQQSNKNKPIKQV
                    ***********************************:************************

    COL             ILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVREVLEEGIKYGGTSI
    N315            ILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVREVLEEGIKHGGTSI
    NCTC8325        ILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVREVLEEGIKYGGTSI
    Newman          ILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVREVLEEGIKYGGTSI
    USA300_FPR3757  ILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVREVLEEGIKYGGTSI
                    ******************************************************:*****

    COL             SDYRHADGKTGEMQLHLNVYKQPVCKVCGSQIETKIIATRNSHYCPVCQK
    N315            SDYRHADGKTGEMQLHLNVYKQPVCKVCGSQIETKIIATRNSHYCPVCQK
    NCTC8325        SDYRHADGKTGEMQLHLNVYKQPVCKVCGSQIETKIIATRNSHYCPVCQK
    Newman          SDYRHADGKTGEMQLHLNVYKQPVCKVCGSQIETKIIATRNSHYCPVCQK
    USA300_FPR3757  SDYRHADGKTGEMQLHLNVYKQPVCKVCGSQIETKIIATRNSHYCPVCQK
                    **************************************************