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Summary[edit source | edit]

  • pan ID?: SAUPAN004558000
  • symbol?: splF
  • description?: serine protease SplF

      descriptions from strain specific annotations:

    • serine protease SplF
    • serine protease SplF, putative
    • peptidase S1 and S6, chymotrypsin/Hap
    • peptidase S1 and S6 chymotrypsin/Hap
    • pseudogene
    • S1B family serine protease SplF
    • serine proteinase
  • strand?: -
  • coordinates?: 4789723..4790442
  • synteny block?: BlockID0035470
  • occurrence?: in 75% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    SA1627 (splF)
    NCTC8325:
    Newman:
    NWMN_1701 (splF)
    USA300_FPR3757:
    04-02981:
    SA2981_1764 (splF)
    08BA02176:
    11819-97:
    MS7_1809
    71193:
    ECT-R 2:
    ECTR2_1642
    ED133:
    SAOV_1795 (splF)
    ED98:
    SAAV_1817
    HO 5096 0412:
    JH1:
    SaurJH1_1896
    JH9:
    SaurJH9_1861
    JKD6008:
    JKD6159:
    LGA251:
    SARLGA251_16910
    M013:
    MRSA252:
    SAR1900 (splF)
    MSHR1132:
    MSSA476:
    SAS1733
    Mu3:
    SAHV_1794 (splF)
    Mu50:
    SAV1809 (splF)
    MW2:
    MW1752 (splF)
    RF122:
    SAB1669c (splF)
    ST398:
    T0131:
    SAT0131_01929 (saeR)
    TCH60:
    HMPREF0772_11334 (splF)
    TW20:
    SATW20_18060 (splF)
    USA300_TCH1516:
    USA300HOU_1801 (splF)
    VC40:
    SAVC_08280

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MNKNIIIKSIAALTILTSITGVGTTMVEGIQQTAKAENTVKQITNTNVAPYSGVTWMGAG
    N315            MNKNIIIKSIAALTILTSVTGVGTTMVEGIQQTAKAENTVKQITNTNVAPYSGVTWMGAG
    NCTC8325        MNKNIIIKSIAALTILTSITGVGTTMVEGIQQTAKAENTVKQITNTNVAPYSGVTWMGAG
    Newman          MNKNIIIKSIAALTILTSITGVGTTMVEGIQQTAKAENTVKQITNTNVAPYSGVTWMGAG
    USA300_FPR3757  MNKNIIIKSIGALTILTSITGVGTTMVEGIQQTAKAENTVKQITNTNVAPYSGVTWMGAG
                    **********.*******:*****************************************

    COL             TGFVVGNHTIITNKHVTYHMKVGDEIKAHPNGFYNNGGGLYKVTKIVDYPGKEDIAVVQV
    N315            TGFVVGNHTIITNKHVTYHMKVGDEIKAHPNGFYNNGGGLYKVTKIVDYPGKEDIAVVQV
    NCTC8325        TGFVVGNHTIITNKHVTYHMKVGDEIKAHPNGFYNNGGGLYKVTKIVDYPGKEDIAVVQV
    Newman          TGFVVGNHTIITNKHVTYHMKVGDEIKAHPNGFYNNGGGLYKVTKIVDYPGKEDIAVVQV
    USA300_FPR3757  TGFVVGNHTIITNKHVTYHMKVGDEIKAHPNGFYNNGGGLYKVTKIVDYPGKEDIAVVQV
                    ************************************************************

    COL             EEKSTQPKGRKFKDFTSKFNIASEAKENEPISVIGYPNPNGNKLQMYESTGKVLSVNGNI
    N315            EEKSTQPKGRKFKDFTSKFNIASEAKENEPISVIGYPNPNGNKLQMYESTGKVLSVNGNI
    NCTC8325        EEKSTQPKGRKFKDFTSKFNIASEAKENEPISVIGYPNPNGNKLQMYESTGKVLSVNGNI
    Newman          EEKSTQPKGRKFKDFTSKFNIASEAKENEPISVIGYPNPNGNKLQMYESTGKVLSVNGNI
    USA300_FPR3757  EEKSTQPKGRKFKDFTSKFNIASEAKENEPISVIGYPNPNGNKLQMYESTGKVLSVNGNI
                    ************************************************************

    COL             VSSDAIIQPGSSGSPILNSKHEAIGVIYAGNKPSGESTRGFAVYFSPEIKKFIADNLDK
    N315            VSSDAIIQPGSSGSPILNSKHEAIGVIYAGNKPSGESTRGFAVYFSPEIKKFIADNLDK
    NCTC8325        VSSDAIIQPGSSGSPILNSKHEAIGVIYAGNKPSGESTRGFAVYFSPEIKKFIADNLDK
    Newman          VSSDAIIQPGSSGSPILNSKHEAIGVIYAGNKPSGESTRGFAVYFSPEIKKFIADNLDK
    USA300_FPR3757  VSSDAIIQPGSSGSPILNSKHEAIGVIYAGNKPSGESTRGFAVYFSPEIKKFIADNLDK
                    ***********************************************************