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Summary[edit source | edit]

  • pan ID?: SAUPAN004567000
  • symbol?: splA
  • description?: serine protease SplA

      descriptions from strain specific annotations:

    • serine protease SplA
    • peptidase S1 and S6, chymotrypsin/Hap
    • peptidase S1 and S6 chymotrypsin/Hap
    • pseudogene
  • strand?: -
  • coordinates?: 4802338..4803054
  • synteny block?: BlockID0035550
  • occurrence?: in 69% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1869 (splA)
    N315:
    SA1631 (splA)
    NCTC8325:
    Newman:
    NWMN_1706 (splA)
    USA300_FPR3757:
    04-02981:
    SA2981_1768 (splA)
    08BA02176:
    11819-97:
    MS7_1814 (splA)
    71193:
    ECT-R 2:
    ECTR2_1645
    ED133:
    SAOV_1798c (splA)
    ED98:
    SAAV_1821 (splA)
    HO 5096 0412:
    JH1:
    SaurJH1_1899
    JH9:
    SaurJH9_1864
    JKD6008:
    JKD6159:
    LGA251:
    SARLGA251_16970 (splA)
    M013:
    MRSA252:
    MSHR1132:
    MSSA476:
    SAS1736
    Mu3:
    SAHV_1798 (splA)
    Mu50:
    SAV1813 (splA)
    MW2:
    MW1755 (splA)
    RF122:
    SAB1673c
    ST398:
    T0131:
    SAT0131_01933
    TCH60:
    TW20:
    SATW20_18110 (splA)
    USA300_TCH1516:
    USA300HOU_1806 (splA)
    VC40:
    SAVC_08305

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MNKNVMVKGLTALTILTILTSLGFAENISNQPHSIAKAEKNVKEITDATKEPYNSVVAFV
    N315            MNKNVMVKGLTA---LTILTSLGFAENISNQPHSIAKAEKNVKEITDATKAPYNSVVAFA
    NCTC8325        MNKNVMVKGLTA---LTILTSLGFAENISNQPHSIAKAEKNVKEITDATKEPYNSVVAFV
    Newman          MNKNVMVKGLTALTILTILTSLGFAENISNQPHSIAKAEKNVKEITDATKEPYNSVVAFV
    USA300_FPR3757  MNKNVMVKGLTA---LTILTSLGFAENISNQPHSIAKAEKNVKEITDATKEPYNSVVAFV
                    ************   *********************************** ********.

    COL             GGTGVVVGKNTIVTNKHIAKSNDIFKNRVSAHHSSKGKGGGNYDVKDIVEYPGKEDLAIV
    N315            GGTGVVVGKNTIVTNKHIAKSNDIFKNRVAAHYSSKGKGGGNYDVKDIVEYPGKEDLAIV
    NCTC8325        GGTGVVVGKNTIVTNKHIAKSNDIFKNRVSAHHSSKGKGGGNYDVKDIVEYPGKEDLAIV
    Newman          GGTGVVVGKNTIVTNKHIAKSNDIFKNRVSAHHSSKGKGGGNYDVKDIVEYPGKEDLAIV
    USA300_FPR3757  GGTGVVVGKNTIVTNKHIAKSNDIFKNRVSAHHSSKGKGGGNYDVKDIVEYPGKEDLAIV
                    *****************************:**:***************************

    COL             HVHETSTEGLNFNKNVSYTKFADGAKVKDRISVIGYPKGAQTKYKMFESTGTINHISGTF
    N315            HVHETSTEGLNFNKNVSYTKFAEGAKAKDRISVIGYPKGAQTKYKMFESTGTINHISGTF
    NCTC8325        HVHETSTEGLNFNKNVSYTKFADGAKVKDRISVIGYPKGAQTKYKMFESTGTINHISGTF
    Newman          HVHETSTEGLNFNKNVSYTKFADGAKVKDRISVIGYPKGAQTKYKMFESTGTINHISGTF
    USA300_FPR3757  HVHETSTEGLNFNKNVSYTKFADGAKVKDRISVIGYPKGAQTKYKMFESTGTINHISGTF
                    **********************:***.*********************************

    COL             MEFDAYAQPGNSGSPVLNSKHELIGILYAGSGKDESEKNFGVYFTPQLKEFIQNNIEK
    N315            IEFDAYAQPGNSGSPVLNSKHELIGILYAGSGKDESEKNFGVYFTPQLKEFIQNNIEK
    NCTC8325        MEFDAYAQPGNSGSPVLNSKHELIGILYAGSGKDESEKNFGVYFTPQLKEFIQNNIEK
    Newman          MEFDAYAQPGNSGSPVLNSKHELIGILYAGSGKDESEKNFGVYFTPQLKEFIQNNIEK
    USA300_FPR3757  MEFDAYAQPGNSGSPVLNSKHELIGILYAGSGKDESEKNFGVYFTPQLKEFIQNNIEK
                    :*********************************************************