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PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

Summary[edit | edit source]

  • pan ID?: SAUPAN005007000
  • symbol?: truncated mapW
  • synonym:
  • description?: MAP domain-containing protein

      descriptions from strain specific annotations:

    • MAP domain-containing protein
    • map-like protein
    • extracellular adherence protein of broad specificity Eap/Map
    • truncated map-w protein
    • cell surface protein
    • map protein, programmed
    • MHC class II analog
    • MHC class II antigen-like protein
    • outer membrane protein
    • pseudogene
  • strand?: -
  • coordinates?: 5188336..5190762
  • synteny block?: BlockID0038880
  • occurrence?: in 58% of 33 strains

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1896
    08BA02176:
    C248_2025 (map)
    11819-97:
    6850:
    RSAU_001833
    71193:
    ST398NM01_2058
    ECT-R 2:
    ED133:
    SAOV_2039
    ED98:
    SAAV_2006 (map)
    HO 5096 0412:
    SAEMRSA15_18530
    JH1:
    SaurJH1_2028
    JH9:
    SaurJH9_1996
    JKD6008:
    JKD6159:
    LGA251:
    SARLGA251_18210 (mapW)
    M013:
    M013TW_1974
    MRSA252:
    SAR2030
    MSHR1132:
    MSSA476:
    Mu3:
    SAHV_1923
    Mu50:
    SAV1938
    MW2:
    MW1879 (map-W)
    RF122:
    SAB1873c
    ST398:
    SAPIG2058 (map)
    T0131:
    TCH60:
    HMPREF0772_11204 (map)
    TW20:
    USA300_TCH1516:
    VC40:

Genome Viewer[edit | edit source]

Alignments[edit | edit source]

  • alignment of orthologues: