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Summary[edit source | edit]

  • pan ID?: SAUPAN005356000
  • symbol?: ddl
  • description?: D-alanyl-alanine synthetase A

      descriptions from strain specific annotations:

    • D-alanyl-alanine synthetase A
    • D-alanine--D-alanine ligase
    • D-alanine--D-alanine ligase (D-alanylalanine synthetase)(D-Ala-D-Ala ligase)
  • strand?: -
  • coordinates?: 5533743..5534813
  • synteny block?: BlockID0041530
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL2074 (ddl)
    N315:
    SA1887 (ddl)
    NCTC8325:
    Newman:
    NWMN_1987 (ddl)
    USA300_FPR3757:
    04-02981:
    SA2981_2024 (ddlA)
    08BA02176:
    C248_2094
    11819-97:
    MS7_2099 (ddl)
    71193:
    ST398NM01_2124
    ECT-R 2:
    ECTR2_1939
    ED133:
    SAOV_2124c
    ED98:
    SAAV_2137 (ddl)
    HO 5096 0412:
    SAEMRSA15_19920
    JH1:
    SaurJH1_2158 (ddl)
    JH9:
    SaurJH9_2120 (ddl)
    JKD6008:
    SAA6008_02121 (ddl)
    JKD6159:
    SAA6159_01997 (ddl)
    LGA251:
    SARLGA251_18850
    M013:
    M013TW_2041
    MRSA252:
    SAR2170 (ddl)
    MSHR1132:
    SAMSHR1132_19070
    MSSA476:
    SAS1987 (ddl)
    Mu3:
    SAHV_2068 (ddl)
    Mu50:
    SAV2083 (ddl)
    MW2:
    MW2006 (ddl)
    RF122:
    SAB1967c (ddl)
    ST398:
    SAPIG2124
    T0131:
    SAT0131_02241
    TCH60:
    HMPREF0772_11112 (ddl)
    TW20:
    SATW20_22220
    USA300_TCH1516:
    USA300HOU_2078 (ddl)
    VC40:
    SAVC_09295 (ddl)

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYITNDGDWRKQNNITAEIK
    N315            MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYITNDGDWRKQNNITAEIK
    NCTC8325        MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYITNDGDWRKQNNITAEIK
    Newman          MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYITNDGDWRKQNNITAEIK
    USA300_FPR3757  MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYITNDGDWRKQNNITAEIK
                    ************************************************************

    COL             STDELHLENGEALEISQLLKESSSGQPYDAVFPLLHGPNGEDGTIQGLFEVLDVPYVGNG
    N315            STDELHLENGEALEISQLLKESSSGQPYDAVFPLLHGPNGEDGTIQGLFEVLDVPYVGNG
    NCTC8325        STDELHLENGEALEISQLLKESSSGQPYDAVFPLLHGPNGEDGTIQGLFEVLDVPYVGNG
    Newman          STDELHLENGEALEISQLLKESSSGQPYDAVFPLLHGPNGEDGTIQGLFEVLDVPYVGNG
    USA300_FPR3757  STDELHLENGEALEISQLLKESSSGQPYDAVFPLLHGPNGEDGTIQGLFEVLDVPYVGNG
                    ************************************************************

    COL             VLSAASSMDKLVMKQLFEHRGLPQLPYISFLRSEYEKYEHNILKLVNDKLNYPVFVKPAN
    N315            VLSAASSMDKLVMKQLFEHRGLPQLPYISFLRSEYEKYEHNILKLVNDKLNYPVFVKPAN
    NCTC8325        VLSAASSMDKLVMKQLFEHRGLPQLPYISFLRSEYEKYEHNILKLVNDKLNYPVFVKPAN
    Newman          VLSAASSMDKLVMKQLFEHRGLPQLPYISFLRSEYEKYEHNILKLVNDKLNYPVFVKPAN
    USA300_FPR3757  VLSAASSMDKLVMKQLFEHRGLPQLPYISFLRSEYEKYEHNILKLVNDKLNYPVFVKPAN
                    ************************************************************

    COL             LGSSVGISKCNNEAELKEGIKEAFQFDRKLVIEQGVNAREIEVAVLGNDYPEATWPGEVV
    N315            LGSSVGISKCNNEAELKEGIKEAFQFDRKLVIEQGVNAREIEVAVLGNDYPEATWPGEVV
    NCTC8325        LGSSVGISKCNNEAELKEGIKEAFQFDRKLVIEQGVNAREIEVAVLGNDYPEATWPGEVV
    Newman          LGSSVGISKCNNEAELKEGIKEAFQFDRKLVIEQGVNAREIEVAVLGNDYPEATWPGEVV
    USA300_FPR3757  LGSSVGISKCNNEAELKEGIKEAFQFDRKLVIEQGVNAREIEVAVLGNDYPEATWPGEVV
                    ************************************************************

    COL             KDVAFYDYKSKYKDGKVQLQIPADLDEDVQLTLRNMALEAFKATDCSGLVRADFFVTEDN
    N315            KDVAFYDYKSKYKDGKVQLQIPADLDEDVQLTLRNMALEAFKATDCSGLVRADFFVTEDN
    NCTC8325        KDVAFYDYKSKYKDGKVQLQIPADLDEDVQLTLRNMALEAFKATDCSGLVRADFFVTEDN
    Newman          KDVAFYDYKSKYKDGKVQLQIPADLDEDVQLTLRNMALEAFKATDCSGLVRADFFVTEDN
    USA300_FPR3757  KDVAFYDYKSKYKDGKVQLQIPADLDEDVQLTLRNMALEAFKATDCSGLVRADFFVTEDN
                    ************************************************************

    COL             QIYINETNAMPGFTAFSMYPKLWENMGLSYPELITKLIELAKERHQDKQKNKYKID
    N315            QIYINETNAMPGFTAFSMYPKLWENMGLSYPELITKLIELAKERHQDKQKNKYKID
    NCTC8325        QIYINETNAMPGFTAFSMYPKLWENMGLSYPELITKLIELAKERHQDKQKNKYKID
    Newman          QIYINETNAMPGFTAFSMYPKLWENMGLSYPELITKLIELAKERHQDKQKNKYKID
    USA300_FPR3757  QIYINETNAMPGFTAFSMYPKLWENMGLSYPELITKLIELAKERHQDKQKNKYKID
                    ********************************************************