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Summary[edit source | edit]

  • pan ID?: SAUPAN005402000
  • symbol?: mnaA
  • description?: UDP-GlcNAc 2-epimerase

      descriptions from strain specific annotations:

    • UDP-GlcNAc 2-epimerase
    • UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
    • UDP-N-acetylglucosamine 2-epimerase
  • strand?: -
  • coordinates?: 5562687..5563818
  • synteny block?: BlockID0041980
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    SA1913 (mnaA)
    NCTC8325:
    Newman:
    NWMN_2015 (mnaA)
    USA300_FPR3757:
    04-02981:
    SA2981_2051 (mnaA)
    08BA02176:
    C248_2125 (mnaA)
    11819-97:
    MS7_2127
    71193:
    ST398NM01_2153
    ECT-R 2:
    ECTR2_1967
    ED133:
    SAOV_2152c
    ED98:
    SAAV_2166
    HO 5096 0412:
    SAEMRSA15_20190 (mnaA)
    JH1:
    SaurJH1_2185
    JH9:
    SaurJH9_2147
    JKD6008:
    SAA6008_02149 (mnaA)
    JKD6159:
    SAA6159_02025 (mnaA)
    LGA251:
    SARLGA251_19120 (mnaA)
    M013:
    M013TW_2070
    MRSA252:
    SAR2199 (mnaA)
    MSHR1132:
    SAMSHR1132_19340
    MSSA476:
    SAS2014
    Mu3:
    SAHV_2095 (mnaA)
    Mu50:
    SAV2111 (mnaA)
    MW2:
    MW2035 (mnaA)
    RF122:
    SAB1995c (mnaA)
    ST398:
    SAPIG2153
    T0131:
    SAT0131_02273
    TCH60:
    HMPREF0772_11080 (mnaA)
    TW20:
    SATW20_22490 (mnaA)
    USA300_TCH1516:
    USA300HOU_2101 (mnaA)
    VC40:
    SAVC_09430

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             -MKKIMTIFGTRPEAIKMAPLVKALEQEKMLEPIVVVTAQHREMLDSVLSTFEIKPKYDL
    N315            MMKKIMTIFGTRPEAIKMAPLVKALEQEKMLEPIVVVTAQHREMLDSVLSTFEIKPKYDL
    NCTC8325        -MKKIMTIFGTRPEAIKMAPLVKALEQEKMLEPIVVVTAQHREMLDSVLSTFEIKPKYDL
    Newman          MMKKIMTIFGTRPEAIKMAPLVKALEQEKMLEPIVVVTAQHREMLDSVLSTFEIKPKYDL
    USA300_FPR3757  -MKKIMTIFGTRPEAIKMAPLVKALEQEKMLEPIVVVTAQHREMLDSVLSTFEIKPKYDL
                     ***********************************************************

    COL             NIMKSGQTLSEITSKSITQLEQVIQLEKPDMVLVHGDTMTTFAGGLAAFYNQVPIGHVEA
    N315            NIMKSGQTLSEITSKSITQLEQVIQLEKPDMVLVHGDTMTTFAGGLAAFYNQVPIGHVEA
    NCTC8325        NIMKSGQTLSEITSKSITQLEQVIQLEKPDMVLVHGDTMTTFAGGLAAFYNQVPIGHVEA
    Newman          NIMKSGQTLSEITSKSITQLEQVIQLEKPDMVLVHGDTMTTFAGGLAAFYNQVPIGHVEA
    USA300_FPR3757  NIMKSGQTLSEITSKSITQLEQVIQLEKPDMVLVHGDTMTTFAGGLAAFYNQVPIGHVEA
                    ************************************************************

    COL             GLRSYDKYSPFPEEVNRQLVGVLADLHFAPTKNAASHLLSEGKYSESVVVTGNTAIDAMK
    N315            GLRSYDKYSPFPEEVNRQLVGVLADLHFAPTKNAASHLLSEGKYSESVVVTGNTAIDAMK
    NCTC8325        GLRSYDKYSPFPEEVNRQLVGVLADLHFAPTKNAASHLLSEGKYSESVVVTGNTAIDAMK
    Newman          GLRSYDKYSPFPEEVNRQLVGVLADLHFAPTKNAASHLLSEGKYSESVVVTGNTAIDAMK
    USA300_FPR3757  GLRSYDKYSPFPEEVNRQLVGVLADLHFAPTKNAASHLLSEGKYSESVVVTGNTAIDAMK
                    ************************************************************

    COL             YTVDDNYKSNIMDKYHDKKFILMTAHRRENIGKPMENIFKAVRRLIDEYTDLALVYPMHK
    N315            YTVDDNYKSNIMDKYHDKKFILMTAHRRENIGKPMENIFKAVRRLIDEYTDLALVYPMHK
    NCTC8325        YTVDDNYKSNIMDKYHDKKFILMTAHRRENIGKPMENIFKAVRRLIDEYTDLALVYPMHK
    Newman          YTVDDNYKSNIMDKYHDKKFILMTAHRRENIGKPMENIFKAVRRLIDEYTDLALVYPMHK
    USA300_FPR3757  YTVDDNYKSNIMDKYHDKKFILMTAHRRENIGKPMENIFKAVRRLIDEYTDLALVYPMHK
                    ************************************************************

    COL             NPKVREVAQKILGSHDRIELIEPLDVVDFHNFAKKSYFILTDSGGIQEEAPSFNKPVLVL
    N315            NPKVREVAQKILGSHDRIELIEPLDVVDFHNFAKKSYFILTDSGGIQEEAPSFNKPVLVL
    NCTC8325        NPKVREVAQKILGSHDRIELIEPLDVVDFHNFAKKSYFILTDSGGIQEEAPSFNKPVLVL
    Newman          NPKVREVAQKILGSHDRIELIEPLDVVDFHNFAKKSYFILTDSGGIQEEAPSFNKPVLVL
    USA300_FPR3757  NPKVREVAQKILGSHDRIELIEPLDVVDFHNFAKKSYFILTDSGGIQEEAPSFNKPVLVL
                    ************************************************************

    COL             RSVTERPEGVEAGTLKVIGTNKQNVYQAAKELIDDERLYHQMSEASNPYGDGFASERIVN
    N315            RSVTERPEGVEAGTLKVIGTNKQNVYQAAKELIDDERLYHQMSEASNPYGDGFASERIVN
    NCTC8325        RSVTERPEGVEAGTLKVIGTNKQNVYQAAKELIDDERLYHQMSEASNPYGDGFASERIVN
    Newman          RSVTERPEGVEAGTLKVIGTNKQNVYQAAKELIDDERLYHQMSEASNPYGDGFASERIVN
    USA300_FPR3757  RSVTERPEGVEAGTLKVIGTNKQNVYQAAKELIDDERLYHQMSEASNPYGDGFASERIVN
                    ************************************************************

    COL             HIKYYLNLITEKPSDF
    N315            HIKYYLNLITEKPSDF
    NCTC8325        HIKYYLNLITEKPSDF
    Newman          HIKYYLNLITEKPSDF
    USA300_FPR3757  HIKYYLNLITEKPSDF
                    ****************