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Summary[edit source | edit]

  • pan ID?: SAUPAN005492000
  • symbol?: glmS
  • description?: glucosamine--fructose-6-phosphate aminotransferase

      descriptions from strain specific annotations:

    • glucosamine--fructose-6-phosphate aminotransferase
    • Glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
    • glutamine-fructose-6-phosphate transaminase
    • glutamine-fructose-6-phosphate transaminase (isomerizing)
  • strand?: -
  • coordinates?: 5648586..5650441
  • synteny block?: BlockID0042740
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL2145 (glmS)
    N315:
    SA1959 (glmS)
    NCTC8325:
    Newman:
    NWMN_2056 (glmS)
    USA300_FPR3757:
    04-02981:
    SA2981_2093 (glmS)
    08BA02176:
    C248_2183 (glmS)
    11819-97:
    MS7_2170 (glmS)
    71193:
    ST398NM01_2209
    ECT-R 2:
    ECTR2_2008 (glmS)
    ED133:
    SAOV_2193c
    ED98:
    SAAV_2208 (glmS)
    HO 5096 0412:
    SAEMRSA15_20610 (glmS)
    JH1:
    SaurJH1_2225
    JH9:
    SaurJH9_2187
    JKD6008:
    SAA6008_02191 (glmS)
    JKD6159:
    SAA6159_02064 (glmS)
    LGA251:
    SARLGA251_19510 (glmS)
    M013:
    M013TW_2113
    MRSA252:
    SAR2242 (glmS)
    MSHR1132:
    SAMSHR1132_19870
    MSSA476:
    SAS2055
    Mu3:
    SAHV_2138 (glmS)
    Mu50:
    SAV2154 (glmS)
    MW2:
    MW2080 (glmS)
    RF122:
    SAB2034c (glmS)
    ST398:
    SAPIG2209 (glmS)
    T0131:
    SAT0131_02318
    TCH60:
    HMPREF0772_11039 (glmS)
    TW20:
    SATW20_22900 (glmS)
    USA300_TCH1516:
    USA300HOU_2145 (glmS)
    VC40:
    SAVC_09640

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MCGIVGYIGYDNAKELLLKGLEKLEYRGYDSAGIAVVNDDNTTVFKEKGRIAELRKVADS
    N315            MCGIVGYIGYDNAKELLLKGLEKLEYRGYDSAGIAVVNDDNTTVFKEKGRIAELRKVADS
    NCTC8325        MCGIVGYIGYDNAKELLLKGLEKLEYRGYDSAGIAVVNDDNTTVFKEKGRIAELRKVADS
    Newman          MCGIVGYIGYDNAKELLLKGLEKLEYRGYDSAGIAVVNDDNTTVFKEKGRIAELRKVADS
    USA300_FPR3757  MCGIVGYIGYDNAKELLLKGLEKLEYRGYDSAGIAVVNDDNTTVFKEKGRIAELRKVADS
                    ************************************************************

    COL             SDFDGPVGIGHTRWATHGVPNHENSHPHQSSNGRFTLVHNGVIENYEELKGEYLQGVSFI
    N315            SDFDGPVGIGHTRWATHGVPNHENSHPHQSSNGRFTLVHNGVIENYEELKGEYLQGVSFI
    NCTC8325        SDFDGPVGIGHTRWATHGVPNHENSHPHQSSNGRFTLVHNGVIENYEELKGEYLQGVSFI
    Newman          SDFDGPVGIGHTRWATHGVPNHENSHPHQSSNGRFTLVHNGVIENYEELKGEYLQGVSFI
    USA300_FPR3757  SDFDGPVGIGHTRWATHGVPNHENSHPHQSSNGRFTLVHNGVIENYEELKGEYLQGVSFI
                    ************************************************************

    COL             SETDTEVIVQLVEYFSNQGLSTEEAFTKVVSLLHGSYALGLLDAEDKDTIYVAKNKSPLL
    N315            SETDTEVIVQLVEYFSNQGLSTEEAFTKVVSLLHGSYALGLLDAEDKDTIYVAKNKSPLL
    NCTC8325        SETDTEVIVQLVEYFSNQGLSTEEAFTKVVSLLHGSYALGLLDAEDKDTIYVAKNKSPLL
    Newman          SETDTEVIVQLVEYFSNQGLSTEEAFTKVVSLLHGSYALGLLDAEDKDTIYVAKNKSPLL
    USA300_FPR3757  SETDTEVIVQLVEYFSNQGLSTEEAFTKVVSLLHGSYALGLLDAEDKDTIYVAKNKSPLL
                    ************************************************************

    COL             LGVGEGFNVIASDALAMLQVTSEYKEIHDHEIVIVKKDEVIIKDADGNVVERDSYIAEID
    N315            LGVGEGFNVIASDALAMLQVTSEYKEIHDHEIVIVKKDEVIIKDADGNVVERDSYIAEID
    NCTC8325        LGVGEGFNVIASDALAMLQVTSEYKEIHDHEIVIVKKDEVIIKDADGNVVERDSYIAEID
    Newman          LGVGEGFNVIASDALAMLQVTSEYKEIHDHEIVIVKKDEVIIKDADGNVVERDSYIAEID
    USA300_FPR3757  LGVGEGFNVIASDALAMLQVTSEYKEIHDHEIVIVKKDEVIIKDADGNVVERDSYIAEID
                    ************************************************************

    COL             ASDAEKGVYAHYMLKEIHEQPAVMRRIIQEYQDAEGNLKIDQDIINDVKEADRIYVIAAG
    N315            ASDAEKGVYAHYMLKEIHEQPAVMRRIIQEYQDAEGNLKIDQDIINDVKEADRIYVIAAG
    NCTC8325        ASDAEKGVYAHYMLKEIHEQPAVMRRIIQEYQDAEGNLKIDQDIINDVKEADRIYVIAAG
    Newman          ASDAEKGVYAHYMLKEIHEQPAVMRRIIQEYQDAEGNLKIDQDIINDVKEADRIYVIAAG
    USA300_FPR3757  ASDAEKGVYAHYMLKEIHEQPAVMRRIIQEYQDAEGNLKIDQDIINDVKEADRIYVIAAG
                    ************************************************************

    COL             TSYHAGLVGKEFLEKWAGVPTEVHVASEFVYNMPLLSEKPLFVYISQSGETADSRAVLVE
    N315            TSYHAGLVGKEFLEKWAGVPTEVHVASEFVYNMPLLSEKPLFVYISQSGETADSRAVLVE
    NCTC8325        TSYHAGLVGKEFLEKWAGVPTEVHVASEFVYNMPLLSEKPLFVYISQSGETADSRAVLVE
    Newman          TSYHAGLVGKEFLEKWAGVPTEVHVASEFVYNMPLLSEKPLFVYISQSGETADSRAVLVE
    USA300_FPR3757  TSYHAGLVGKEFLEKWAGVPTEVHVASEFVYNMPLLSEKPLFVYISQSGETADSRAVLVE
                    ************************************************************

    COL             TNKLGHKSLTITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAKE
    N315            TNKLGHKSLTITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAKE
    NCTC8325        TNKLGHKSLTITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAKE
    Newman          TNKLGHKSLTITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAKE
    USA300_FPR3757  TNKLGHKSLTITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAKE
                    ************************************************************

    COL             HGREADIDLLRELAKVTTAIEAIVDDAPIMEQIATDFLETTRNAFFIGRTIDYNVSLEGA
    N315            HGREADIDLLRELAKVTTAIEAIVDDAPIMEQIATDFLETTRNAFFIGRTIDYNVSLEGA
    NCTC8325        HGREADIDLLRELAKVTTAIEAIVDDAPIMEQIATDFLETTRNAFFIGRTIDYNVSLEGA
    Newman          HGREADIDLLRELAKVTTAIEAIVDDAPIMEQIATDFLETTRNAFFIGRTIDYNVSLEGA
    USA300_FPR3757  HGREADIDLLRELAKVTTAIEAIVDDAPIMEQIATDFLETTRNAFFIGRTIDYNVSLEGA
                    ************************************************************

    COL             LKLKEISYIQAEGFAGGELKHGTIALIEEGTPVVGLATQEKVNLSIRGNVKEVVARGAHP
    N315            LKLKEISYIQAEGFAGGELKHGTIALIEDGTPVVALATQENVNLSIRGNVKEVVARGAHP
    NCTC8325        LKLKEISYIQAEGFAGGELKHGTIALIEEGTPVVGLATQEKVNLSIRGNVKEVVARGAHP
    Newman          LKLKEISYIQAEGFAGGELKHGTIALIEEGTPVVGLATQEKVNLSIRGNVKEVVARGAHP
    USA300_FPR3757  LKLKEISYIQAEGFAGGELKHGTIALIEEGTPVVGLATQEKVNLSIRGNVKEVVARGAHP
                    ****************************:*****.*****:*******************

    COL             CIISMEGLEKEGDTYVIPHVHELLTPLVSVVALQLISYYAALHRDLDVDKPRNLAKSVTV
    N315            CIISMEGLEKEGDTYVIPHVHELLTPLVSVVALQLISYYAALHRDLDVDKPRNLAKSVTV
    NCTC8325        CIISMEGLEKEGDTYVIPHVHELLTPLVSVVALQLISYYAALHRDLDVDKPRNLAKSVTV
    Newman          CIISMEGLEKEGDTYVIPHVHELLTPLVSVVALQLISYYAALHRDLDVDKPRNLAKSVTV
    USA300_FPR3757  CIISMEGLEKEGDTYVIPHVHELLTPLVSVVALQLISYYAALHRDLDVDKPRNLAKSVTV
                    ************************************************************

    COL             E
    N315            E
    NCTC8325        E
    Newman          E
    USA300_FPR3757  E
                    *