Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN005582000
- symbol?: —
- synonym:
- description?: zinc-binding alcohol dehydrogenase
- zinc-binding alcohol dehydrogenase
- alcohol dehydrogenase, zinc-containing
- alcohol dehydrogenase
- arginate lyase-family protein
- zinc-binding alcohol dehydrogenase family protein
- Alcohol dehydrogenase zinc-binding type 1
- Zinc-type alcohol dehydrogenase-like protein
- alcohol dehydrogenase, zinc-binding domain protein
- alginate lyase
- Bifunctional protein: zinc-containing alcohol dehydrogenase
- bifunctional protein : zinc-containing alcoholdehydrogenase, quinone oxidoreductase
- putative zinc-binding dehydrogenase
- quinone oxidoreductase ( NADPH:quinone reductase)
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5721768..5722775
- synteny block?: BlockID0043420
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2124
08BA02176:
C248_2224
11819-97:
MS7_2209
6850:
RSAU_002030
71193:
ST398NM01_2246
ECT-R 2:
ECTR2_2047
ED133:
SAOV_2233c
ED98:
SAAV_2247
HO 5096 0412:
SAEMRSA15_20910
JH1:
SaurJH1_2256
JH9:
SaurJH9_2217
JKD6008:
SAA6008_02227
JKD6159:
SAA6159_02097
LGA251:
SARLGA251_19810
M013:
M013TW_2152
MRSA252:
SAR2277
MSHR1132:
SAMSHR1132_20180
MSSA476:
SAS2087
Mu3:
SAHV_2170
Mu50:
SAV2186
MW2:
MW2112
RF122:
SAB2067c
ST398:
SAPIG2246
T0131:
SAT0131_02359
TCH60:
HMPREF0772_11005
TW20:
SATW20_23240
USA300_TCH1516:
USA300HOU_2179
VC40:
SAVC_09820
⊟Genome Viewer[edit | edit source]
COL | |
N315 | |
NCTC8325 | |
Newman | |
USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKMIGFEKPFKLEEGNLFKVYEQRKPTPENDDILVKVNSISVNPVDTKQRQMEVTQAPRV
N315 MKMIGFEKPFKLEEGNLFKVYEQRKPTPENDDILVKVNSISVNPVDTKQRQMKVTQAPRV
NCTC8325 MKMIGFEKPFKLEEGNLFKVYEQRKPTPENDDILVKVNSISVNPVDTKQRQMEVTQAPRV
Newman MKMIGFEKPFKLEEGNLFKVYEQRKPTPENDDILVKVNSISVNPVDTKQRQMEVTQAPRV
USA300_FPR3757 MKMIGFEKPFKLEEGNLFKVYEQRKPTPENDDILVKVNSISVNPVDTKQRQMEVTQAPRV
****************************************************:*******
COL LGFDAIGTVEAIGPDVTLFSPGDVVFYAGSPNRQGSNATYQLVSEAIVAKAPHNISANEA
N315 LGFDAIGTVEAIGPDVTLFSPGDVVFYAGSPNRQGSNATYQLVSEAIVAKAPHNISANEA
NCTC8325 LGFDAIGTVEAIGPDVTLFSPGDVVFYAGSPNRQGSNATYQLVSEAIVAKAPHNISANEA
Newman LGFDAIGTVEAIGPDVTLFSPGDVVFYAGSPNRQGSNATYQLVSEAIVAKAPHNISANEA
USA300_FPR3757 LGFDAIGTVEAIGPDVTLFSPGDVVFYAGSPNRQGSNATYQLVSEAIVAKAPHNISANEA
************************************************************
COL VSLPLTGITAYETFFDTFKISTNPAENEGKSVLIINGAGGVGSIATQIAKRYGLTVITTA
N315 VSLPLTGITAYETFFDTFKISHNPSENVGKSVLIINGAGGVGSIATQIAKRYGLTVITTA
NCTC8325 VSLPLTGITAYETFFDTFKISTNPAENEGKSVLIINGAGGVGSIATQIAKRYGLTVITTA
Newman VSLPLTGITAYETFFDTFKISTNPAENEGKSVLIINGAGGVGSIATQIAKRYGLTVITTA
USA300_FPR3757 VSLPLTGITAYETFFDTFKISTNPAENEGKSVLIINGAGGVGSIATQIAKRYGLTVITTA
********************* **:** ********************************
COL SRQETTEWCEKMGADIVLNHKEDLVRQF--KEIPLVDYIFCTYNTDLYYNTMIELIKPLG
N315 SRQETTEWCEKMGADIVLNHKEDLVRQFKEKEIPLVDYIFCTYNTDLYYNTMIELIKPLG
NCTC8325 SRQETTEWCEKMGADIVLNHKEDLVRQF--KEIPLVDYIFCTYNTDLYYNTMIELIKPLG
Newman SRQETTEWCEKMGADIVLNHKEDLVRQF--KEIPLVDYIFCTYNTDLYYNTMIELIKPLG
USA300_FPR3757 SRQETTEWCEKMGADIVLNHKEDLVRQF--KEIPLVDYIFCTYNTDLYYNTMIELIKPLG
**************************** ******************************
COL HITTIVAFNEDQDLNALKLKSITFTHEFMFARPIHRTPDMIKQHEYLEDITKNIESGHYQ
N315 HITTIVAFNEDQDLNALKLKSITFTHEFMFARPIHRTPDMIKQHEYLEDITKNIELGHYQ
NCTC8325 HITTIVAFNEDQDLNALKLKSITFTHEFMFARPIHRTPDMIKQHEYLEDITKNIESGHYQ
Newman HITTIVAFNEDQDLNALKLKSITFTHEFMFARPIHRTPDMIKQHEYLEDITKNIESGHYQ
USA300_FPR3757 HITTIVAFNEDQDLNALKLKSITFTHEFMFARPIHRTPDMIKQHEYLEDITKNIESGHYQ
******************************************************* ****
COL PTTTQVFEGLSPENLYQAHQLLEKQSMIGKLVINI
N315 PTTTQVFEGLSPENLYQAHQLLEKQSMIGKLVINI
NCTC8325 PTTTQVFEGLSPENLYQAHQLLEKQSMIGKLVINI
Newman PTTTQVFEGLSPENLYQAHQLLEKQSMIGKLVINI
USA300_FPR3757 PTTTQVFEGLSPENLYQAHQLLEKQSMIGKLVINI
***********************************