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Summary[edit source | edit]

  • pan ID?: SAUPAN005583000
  • symbol?:
  • description?: quinone oxidoreductase

      descriptions from strain specific annotations:

    • quinone oxidoreductase
    • alcohol dehydrogenase
    • alcohol dehydrogenase, zinc-containing
    • putative NADP-dependent oxidoreductase yncB
    • putative zinc-binding dehydrogenase
    • putative NADP-dependent zinc-binding dehydrogenase
    • putative oxidoreductase YncB
    • 2-alkenal reductase
  • strand?: -
  • coordinates?: 5723083..5724087
  • synteny block?: BlockID0043430
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_2125
    08BA02176:
    C248_2225
    11819-97:
    MS7_2210
    71193:
    ST398NM01_2247
    ECT-R 2:
    ECTR2_2048
    ED133:
    SAOV_2234c
    ED98:
    SAAV_2248
    HO 5096 0412:
    SAEMRSA15_20920
    JH1:
    SaurJH1_2257
    JH9:
    SaurJH9_2218
    JKD6008:
    SAA6008_02228
    JKD6159:
    SAA6159_02098
    LGA251:
    SARLGA251_19820
    M013:
    M013TW_2153
    MRSA252:
    SAR2278
    MSHR1132:
    SAMSHR1132_20190
    MSSA476:
    SAS2088
    Mu3:
    SAHV_2171
    Mu50:
    SAV2187
    MW2:
    MW2113
    RF122:
    SAB2068c
    ST398:
    SAPIG2247
    T0131:
    SAT0131_02361
    TCH60:
    HMPREF0772_11004
    TW20:
    SATW20_23250
    USA300_TCH1516:
    USA300HOU_2180
    VC40:
    SAVC_09825

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MQNKQILFNKIPEGMPQEDTFKIEEIDTPKLESDGVLVQTLYISVDPYMRGRMTKADSYV
    N315            MQNKQILFNKIPEGMPQEDTFKIEEIDTPKLESDGVLVQTLYISVDPYMRGRMTKADSYV
    NCTC8325        MQNKQILFNKIPEGMPQEDTFKIEEIDTPKLESDGVLVQTLYISVDPYMRGRMTKADSYV
    Newman          MQNKQILFNKIPEGMPQEDTFKIEEIDTPKLESDGVLVQTLYISVDPYMRGRMTKADSYV
    USA300_FPR3757  MQNKQILFNKIPEGMPQEDTFKIEEIDTPKLESDGVLVQTLYISVDPYMRGRMTKADSYV
                    ************************************************************

    COL             QPFEIGKPIVSHVVAKVIDSTLADYKKGDVVVGMLPWRIINHVQADQITKVPTTDVPLDL
    N315            QPFEIGKPIVSHVVAKVIDSTLADYKKGDVVVGMLPWRIINHVQADQITKVPTTDVPLDL
    NCTC8325        QPFEIGKPIVSHVVAKVIDSTLADYKKGDVVVGMLPWRIINHVQADQITKVPTTDVPLDL
    Newman          QPFEIGKPIVSHVVAKVIDSTLADYKKGDVVVGMLPWRIINHVQADQITKVPTTDVPLDL
    USA300_FPR3757  QPFEIGKPIVSHVVAKVIDSTLADYKKGDVVVGMLPWRIINHVQADQITKVPTTDVPLDL
                    ************************************************************

    COL             YLSVLGMPGQTAYHGLLDIGQPKAGDTVVVSAASGAVGSVVGQIAKIKGCRVVGIAGGDK
    N315            YLSVLGMPGQTAYHGLLDIGQPKAGDTVVVSAASGAVGSVVGQIAKIKGCRVVGIAGGDK
    NCTC8325        YLSVLGMPGQTAYHGLLDIGQPKAGDTVVVSAASGAVGSVVGQIAKIKGCRVVGIAGGDK
    Newman          YLSVLGMPGQTAYHGLLDIGQPKAGDTVVVSAASGAVGSVVGQIAKIKGCRVVGIAGGDK
    USA300_FPR3757  YLSVLGMPGQTAYHGLLDIGQPKAGDTVVVSAASGAVGSVVGQIAKIKGCRVVGIAGGDK
                    ************************************************************

    COL             KVNYLTETLGFDAGIDYKKEDFAEALAQAVPDGIDVYFENVGGTVGDEVFKHLNRFARVP
    N315            KVNYLTETLGFDAGIDYKKEDFAEALAQAVPDGIDVYFENVGGTVGDEVFKHLNRFARVP
    NCTC8325        KVNYLTETLGFDAGIDYKKEDFAEALAQAVPDGIDVYFENVGGTVGDEVFKHLNRFARVP
    Newman          KVNYLTETLGFDAGIDYKKEDFAEALAQAVPDGIDVYFENVGGTVGDEVFKHLNRFARVP
    USA300_FPR3757  KVNYLTETLGFDAGIDYKKEDFAEALAQAVPDGIDVYFENVGGTVGDEVFKHLNRFARVP
                    ************************************************************

    COL             VCGAISSYNHPEADIGPRIQGTLIKKQVMMRGFLVSEFANAFKEASEQLATWVQEGKIQS
    N315            VCGAISSYNHPEADIGPRIQGTLIKKQVMMRGFLVSEFANAFKEASEQLATWVQEGKIQS
    NCTC8325        VCGAISSYNHPEADIGPRIQGTLIKKQVMMRGFLVSEFANAFKEASEQLATWVQEGKIQS
    Newman          VCGAISSYNHPEADIGPRIQGTLIKKQVMMRGFLVSEFANAFKEASEQLATWVQEGKIQS
    USA300_FPR3757  VCGAISSYNHPEADIGPRIQGTLIKKQVMMRGFLVSEFANAFKEASEQLATWVQEGKIQS
                    ************************************************************

    COL             QVTIEDGFENAPHAFKNLFTGDNFGKQVIKVTE
    N315            QVTIEDGFENAPHAFKNLFTGDNFGKQVIKVTE
    NCTC8325        QVTIEDGFENAPHAFKNLFTGDNFGKQVIKVTE
    Newman          QVTIEDGFENAPHAFKNLFTGDNFGKQVIKVTE
    USA300_FPR3757  QVTIEDGFENAPHAFKNLFTGDNFGKQVIKVTE
                    *********************************