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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005811000
- symbol?: —
- synonym:
- description?: membrane protein
- membrane protein
- membrane spanning protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5895516..5896088
- synteny block?: BlockID0045560
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2266
08BA02176:
C248_2370
11819-97:
MS7_2345
6850:
RSAU_002163
71193:
ST398NM01_2379
ECT-R 2:
ECTR2_2187
ED133:
SAOV_2367c
ED98:
SAAV_2391
HO 5096 0412:
SAEMRSA15_22250
JH1:
SaurJH1_2395
JH9:
SaurJH9_2352
JKD6008:
SAA6008_02364
JKD6159:
—
LGA251:
SARLGA251_21100
M013:
M013TW_2285
MRSA252:
SAR2412
MSHR1132:
SAMSHR1132_21520
MSSA476:
SAS2220
Mu3:
SAHV_2311
Mu50:
SAV2327
MW2:
MW2248
RF122:
SAB2204c
ST398:
SAPIG2379
T0131:
SAT0131_02511
TCH60:
HMPREF0772_10868
TW20:
SATW20_24590
USA300_TCH1516:
USA300HOU_2307
VC40:
SAVC_10500
⊟Genome Viewer[edit | edit source]
COL | |
N315 | |
NCTC8325 | |
Newman | |
USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MALIVSRAILFLILALAFGIATVFPEQKLPLYIVFTLFVAVAIVSNVWFTHQNVKKHIIK
N315 MALIVSRAILFLILALAFGIATVFPEQKLPLYIVFTLFVAVAIIMNVWFTHQNVKKHIIK
NCTC8325 MALIVSRAILFLILALAFGIATVFPEQKLPLYIVFTLFVAVAIVSNVWFTHQNVKKHIIK
Newman MALIVSRAILFLILALAFGIATVFPEQKLPLYIVFTLFVAVAIVSNVWFTHQNVKKHIIK
USA300_FPR3757 MALIVSRAILFLILALAFGIATVFPEQKLPLYIVFTLFVAVAIVSNVWFTHQNVKKHIIK
*******************************************: ***************
COL FNKYVAYFLSFVSGLLYIGFVIYTLTIGSYDVLPIIIFAISIVLVQILENILGISIKNTR
N315 FNKYVAYFLSFVSGLLYIGFVIYTLTIGSYDVLPIIIFAISIVLVQILENILGISIKNTR
NCTC8325 FNKYVAYFLSFVSGLLYIGFVIYTLTIGSYDVLPIIIFAISIVLVQILENILGISIKNTR
Newman FNKYVAYFLSFVSGLLYIGFVIYTLTIGSYDVLPIIIFAISIVLVQILENILGISIKNTR
USA300_FPR3757 FNKYVAYFLSFVSGLLYIGFVIYTLTIGSYDVLPIIIFAISIVLVQILENILGISIKNTR
************************************************************
COL LSNKQLKVISKQRVQQFKVISLILVSVSIVFIFIALMLKWWLLLVISIIVLIIITVAMIV
N315 LSNKQLKVISKQRVQQFKVISLILVSVSIVFIFIALMLKWWLLLVISIIVLIIITVAMIV
NCTC8325 LSNKQLKVISKQRVQQFKVISLILVSVSIVFIFIALMLKWWLLLVISIIVLIIITVAMIV
Newman LSNKQLKVISKQRVQQFKVISLILVSVSIVFIFIALMLKWWLLLVISIIVLIIITVAMIV
USA300_FPR3757 LSNKQLKVISKQRVQQFKVISLILVSVSIVFIFIALMLKWWLLLVISIIVLIIITVAMIV
************************************************************
COL YEKYYTTPD
N315 YEKYYTTPD
NCTC8325 YEKYYTTPD
Newman YEKYYTTPD
USA300_FPR3757 YEKYYTTPD
*********