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Summary[edit source | edit]

  • pan ID?: SAUPAN005965000
  • symbol?: bioB
  • description?: biotin synthase

      descriptions from strain specific annotations:

    • biotin synthase
    • putative biotin synthase
  • strand?: -
  • coordinates?: 6026424..6027432
  • synteny block?: BlockID0047090
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL2426 (bioB)
    N315:
    SA2213 (bioB)
    NCTC8325:
    Newman:
    NWMN_2324 (bioB)
    USA300_FPR3757:
    04-02981:
    SA2981_2362 (bioB)
    08BA02176:
    C248_2473 (bioB)
    11819-97:
    MS7_2440 (bioB)
    71193:
    ST398NM01_2478
    ECT-R 2:
    ECTR2_2284 (bioB)
    ED133:
    SAOV_2474c
    ED98:
    SAAV_2491 (bioB)
    HO 5096 0412:
    SAEMRSA15_23240 (bioB)
    JH1:
    SaurJH1_2499
    JH9:
    SaurJH9_2451
    JKD6008:
    SAA6008_02467 (bioB)
    JKD6159:
    SAA6159_02326 (bioB)
    LGA251:
    SARLGA251_22070 (bioB)
    M013:
    M013TW_2387
    MRSA252:
    SAR2515 (bioB)
    MSHR1132:
    SAMSHR1132_22540
    MSSA476:
    SAS2316
    Mu3:
    SAHV_2409 (bioB)
    Mu50:
    SAV2425 (bioB)
    MW2:
    MW2348 (bioB)
    RF122:
    SAB2306c (bioB)
    ST398:
    SAPIG2478 (bioB)
    T0131:
    SAT0131_02620
    TCH60:
    HMPREF0772_10762 (bioB)
    TW20:
    SATW20_25550 (bioB)
    USA300_TCH1516:
    USA300HOU_2409 (bioB)
    VC40:
    SAVC_11000

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MNLAKRILQGEQLTKETVLKIYEDTNIDTLDLLNEAYILRKHYFGKKVKLNMILNAKSGI
    N315            MNLAKRILQGEQLTKETVLKIYEDTNIDTLDLLNEAYILRKHYFGKKVKLNMILNAKSGI
    NCTC8325        MNLAKRILQGEQLTKETVLKIYEDTNIDTLDLLNEAYILRKHYFGKKVKLNMILNAKSGI
    Newman          MNLAKRILQGEQLTKETVLKIYEDTNIDTLDLLNEAYILRKHYFGKKVKLNMILNAKSGI
    USA300_FPR3757  MNLAKRILQGEQLTKETVLKIYEDTNIDTLDLLNEAYILRKHYFGKKVKLNMILNAKSGI
                    ************************************************************

    COL             CPENCGYCGQSRDIKQKQRYALIPEEQIIDGAKVAHDNHIGTYCIVMSGRGPSDKEVDHI
    N315            CPENCGYCGQSRDIKQKQRYALIPEEQIIDGAKVAHDNHIGTYCIVMSGRGPSDKEVDHI
    NCTC8325        CPENCGYCGQSRDIKQKQRYALIPEEQIIDGAKVAHDNHIGTYCIVMSGRGPSDKEVDHI
    Newman          CPENCGYCGQSRDIKQKQRYALIPEEQIIDGAKVAHDNHIGTYCIVMSGRGPSDKEVDHI
    USA300_FPR3757  CPENCGYCGQSRDIKQKQRYALIPEEQIIDGAKVAHDNHIGTYCIVMSGRGPSDKEVDHI
                    ************************************************************

    COL             SNTVRTIKSQHPQLKICACLGLTNDEQAKKLKSAGVDRYNHNINTSENYHDNVVTTHSYK
    N315            SNTVRTIKSQHPQLKICACLGLTNDEQAKKLKSAGVDRYNHNINTSENYHDNVVTTHSYK
    NCTC8325        SNTVRTIKSQHPQLKICACLGLTNDEQAKKLKSAGVDRYNHNINTSENYHDNVVTTHSYK
    Newman          SNTVRTIKSQHPQLKICACLGLTNDEQAKKLKSAGVDRYNHNINTSENYHDNVVTTHSYK
    USA300_FPR3757  SNTVRTIKSQHPQLKICACLGLTNDEQAKKLKSAGVDRYNHNINTSENYHDNVVTTHSYK
                    ************************************************************

    COL             DRTDTIELMKANNISPCSGVICGMGESNQDIVDMAFALKEMDADSIPINFLHPIKGTKFG
    N315            DRTDTIELMKANNISPCSGVICGMGESNQDIVDMAFALKEMDADSIPINFLHPIKGTKFG
    NCTC8325        DRTDTIELMKANNISPCSGVICGMGESNQDIVDMAFALKEMDADSIPINFLHPIKGTKFG
    Newman          DRTDTIELMKANNISPCSGVICGMGESNQDIVDMAFALKEMDADSIPINFLHPIKGTKFG
    USA300_FPR3757  DRTDTIELMKANNISPCSGVICGMGESNQDIVDMAFALKEMDADSIPINFLHPIKGTKFG
                    ************************************************************

    COL             SMDDLTPMKCLRIVALFRLINPTKEIRIAGGREVNLRSLQPLALKAANSIFVGDYLITGG
    N315            SMDDLTPMKCLRIVALFRLINPTKEIRIAGGREVNLRSLQPLALKAANSIFVGDYLITGG
    NCTC8325        SMDDLTPMKCLRIVALFRLINPTKEIRIAGGREVNLRSLQPLALKAANSIFVGDYLITGG
    Newman          SMDDLTPMKCLRIVALFRLINPTKEIRIAGGREVNLRSLQPLALKAANSIFVGDYLITGG
    USA300_FPR3757  SMDDLTPMKCLRIVALFRLINPTKEIRIAGGREVNLRSLQPLALKAANSIFVGDYLITGG
                    ************************************************************

    COL             QPNQLDYDMINDLGFEIDYDTCENKENKNEVSRAN
    N315            QPNQLDYDMINDLGFEIDYDTCENKENKNDVSRAN
    NCTC8325        QPNQLDYDMINDLGFEIDYDTCENKENKNEVSRAN
    Newman          QPNQLDYDMINDLGFEIDYDTCENKENKNEVSRAN
    USA300_FPR3757  QPNQLDYDMINDLGFEIDYDTCENKENKNEVSRAN
                    *****************************:*****