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Summary[edit | edit source]

  • pan ID?: SAUPAN006010000
  • symbol?:
  • synonym:
  • description?: ABC transporter ATP-binding protein

      descriptions from strain specific annotations:

    • ABC transporter ATP-binding protein
    • ABC transporter, ATP-binding protein, putative
    • ATP-binding cassette domain-containing protein
    • methionine ABC transporter ATP-binding protein
    • ABC superfamily ATP binding cassette transporter, ABC protein
    • ABC transporter family protein
    • ATP-binding ABC transporter
    • putative ABC transport system ATP-binding protein
    • YbbL ABC transporter ATP-binding protein
  • strand?: -
  • coordinates?: 6070498..6071160
  • synteny block?: BlockID0047540
  • occurrence?: in 100% of 33 strains

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_2391
    08BA02176:
    C248_2505
    11819-97:
    MS7_2468
    6850:
    RSAU_002294
    71193:
    ST398NM01_2507
    ECT-R 2:
    ECTR2_2312
    ED133:
    SAOV_2505c
    ED98:
    SAAV_2521
    HO 5096 0412:
    SAEMRSA15_23540
    JH1:
    SaurJH1_2530
    JH9:
    SaurJH9_2481
    JKD6008:
    SAA6008_02496
    JKD6159:
    SAA6159_02352
    LGA251:
    SARLGA251_22350
    M013:
    M013TW_2417
    MRSA252:
    SAR2544
    MSHR1132:
    SAMSHR1132_22820
    MSSA476:
    SAS2346
    Mu3:
    SAHV_2438
    Mu50:
    SAV2454
    MW2:
    MW2378
    RF122:
    SAB2336c
    ST398:
    SAPIG2507
    T0131:
    SAT0131_02654 (rplS)
    TCH60:
    HMPREF0772_10734
    TW20:
    SATW20_25830
    USA300_TCH1516:
    USA300HOU_2444
    VC40:
    SAVC_11145

Genome Viewer[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.307)


    COL             MLLEIKDLVYKASDRIILDHISLKVDKGESIAIIGPSGSGKSTFQKQICNLFSPTSGELY
    N315            MLLEIKDLVYKASDRIILDHISLKVDKGESIAIIGPSGSGKSTFQKQICNLISPTSGELY
    NCTC8325        MLLEIKDLVYKASDRIILDHISLKVDKGESIAIIGPSGSGKSTFQKQICNLFSPTSGELY
    Newman          MLLEIKDLVYKASDRIILDHISLKVDKGESIAIIGPSGSGKSTFQKQICNLFSPTSGELY
    USA300_FPR3757  MLLEIKDLVYKASDRIILDHISLKVDKGESIAIIGPSGSGKSTFQKQICNLFSPTSGELY
                    ***************************************************:********

    COL             FKGKPYNDYDPEELRQRISYLMQQSDLFGETIEDNMIFPSLARNDKFDRKRAKQLIKDVG
    N315            FKGKPYNDYDPEELRQRISYLMQQSDLFGETIEDNMIFPSLARNDKFDRKRAKQLIKDVG
    NCTC8325        FKGKPYNDYDPEELRQRISYLMQQSDLFGETIEDNMIFPSLARNDKFDRKRAKQLIKDVG
    Newman          FKGKPYNDYDPEELRQRISYLMQQSDLFGETIEDNMIFPSLARNDKFDRKRAKQLIKDVG
    USA300_FPR3757  FKGKPYNDYDPEELRQRISYLMQQSDLFGETIEDNMIFPSLARNDKFDRKRAKQLIKDVG
                    ************************************************************

    COL             LGHYQLSSEVENMSGGERQRIAIARQLMYTPDILLLDESTSALDVNNKEKIENIIFKLAD
    N315            LGHYQLSSEVENMSGGERQRIAIARQLMYTPDILLLDESTSALDVNNKEKIENIIFKLVE
    NCTC8325        LGHYQLSSEVENMSGGERQRIAIARQLMYTPDILLLDESTSALDVNNKEKIENIIFKLAD
    Newman          LGHYQLSSEVENMSGGERQRIAIARQLMYTPDILLLDESTSALDVNNKEKIENIIFKLAD
    USA300_FPR3757  LGHYQLSSEVENMSGGERQRIAIARQLMYTPDILLLDESTSALDVNNKEKIENIIFKLAD
                    **********************************************************.:

    COL             QGVAIMWITHSDDQSMRHFQKRITIVDGQISNTEELNQHE
    N315            QDVAIMWITHSDDQSMRHFQKRITIVDGKISKVEELNQHE
    NCTC8325        QGVAIMWITHSDDQSMRHFQKRITIVDGQISNTEELNQHE
    Newman          QGVAIMWITHSDDQSMRHFQKRITIVDGQISNTEELNQHE
    USA300_FPR3757  QGVAIMWITHSDDQSMRHFQKRITIVDGQISNTEELNQHE
                    *.**************************:**:.*******